Phyre 2 alignment of P23721 with c3ffhA

Job Description P23721
Confidence 99.95% Date Thu Jan 5 11:39:37 GMT 2012

Rank 58 Aligned Residues 310

% Identity 15% Template c3ffhA_

PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262.

Resolution 2.31 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence	M	A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G
Query Conservation											.	.
Alig confidence											.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence	L	T	K	I	T	K	L	S	S	N	E	N	P	L	G	T	S	K	K	V	A	A	I	Q	A	N	S	S	V	E	T	E	I	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	R	K	E	V	A	D	F	Y	Q	L	E	E	E	E	.	.	L	I	F	T	A	G	V	D	E
Template Known Secondary structure		S						S	S		S		T	T												T			S				B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T			G	G	G	.	.					S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.

	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence	L	I	E	L	L	T	R	V	L	L	D	T	T	T	N	T	V	X	A	T	P	T	F	V	Q	Y	R	Q	N	.	.	A	L	I	E	G	A	E	V	R	E	I	P	L	L	Q	D	G	E	H	D	L	E	G	X	L	N	A	I	D	E	K	T	T	I	V	W	I	C	N	P	N	N	P	T	G	N	Y	I	E
Template Known Secondary structure											S	T	T								S	S								.	.					T										T	T	S													T	T								S	S		T	T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
	93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

	159	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																			.	.	.	.	.	.	.																							.	.
Query SS confidence								.	.	.	.	.																			.	.	.	.	.	.	.																							.	.
Query Sequence	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	.	.	.	.	.	.	.	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	.	.	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S
Query Conservation								.	.	.	.	.																			.	.	.	.	.	.	.																							.	.
Alig confidence								.	.	.	.	.																			.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence	L	A	D	I	Q	A	F	L	D	R	V	P	S	D	V	L	V	V	L	D	E	A	Y	I	E	Y	V	T	P	Q	P	E	K	H	E	K	L	V	R	T	Y	K	N	L	I	I	T	R	T	F	S	K	I	Y	G	L	A	S	A	R	V	G	Y	G	I	A	D	K	E	I	I	R	Q	L	N	I	V	R	P	P
Template Known Secondary structure									T	T	S		T	T	S							T	T	G	G	G		S	S						G	G	G	G	G	T		T	T							S	S	S	T	T			S	S																			T			S
Template Predicted Secondary structure
Template SS confidence
	171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Sequence	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	I	G	Q	K	L	A	I	E	A	I	K	D	Q	A	F	I	G	E	C	R	T	S	N	A	N	G	I	K	Q	Y	E	A	F	A	K	R	F	E	K	V	K	L	Y	P	A	.	.	.	.	N	G	N	F	V	L	I	D	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B																																							T	T							.	.	.	.		S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
	251	.																		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.

	305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	.	.	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F
Query Conservation																								.	.
Alig confidence		.	.																					.	.													.	.	.
Template Conservation		.	.																																			.	.	.
Template Sequence	G	.	.	I	E	A	G	T	I	F	S	Y	L	E	K	N	G	Y	I	T	R	S	G	A	A	L	G	F	P	T	A	V	R	I	T	I	G	.	.	.	K	E	E	D	N	S	A	V	I	A	L	L	E	K	L
Template Known Secondary structure	S	.	.	S												T	T						T	T	T	T	T		T	T								.	.	.
Template Predicted Secondary structure		.	.																																			.	.	.
Template SS confidence
	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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