Job Description P23721 Confidence 99.62% Date Thu Jan 5 11:39:37 GMT 2012 Rank 226 Aligned Residues 278 % Identity 12% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		17	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure											.	.	.																																																	.	.
Query SS confidence											.	.	.																																																	.	.
Query Sequence		E	V	L	K	Q	A	Q	Q	E	.	.	.	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	.	.	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K
Query Conservation											.	.	.																																																	.	.
Alig confidence											.	.	.																		.	.	.	.	.	.	.	.																	.	.	.					.	.
Template Conservation																															.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		K	V	L	D	A	F	Q	E	N	K	V	S	D	F	H	F	N	P	S	T	G	Y	G	Y	D	D	E	G	R	.	.	.	.	.	.	.	.	D	T	L	E	R	V	Y	A	S	V	F	K	T	E	A	A	.	.	.	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G
Template Known Secondary structure										T	T			G	G	G	G					T	T		T	T					.	.	.	.	.	.	.	.												T		S			.	.	.				T	T	S		S															T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query Sequence		T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	.	.	.	.	.	.	.	.	.	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	.	.	.	.	P	N	E	T	I	D	G	I	A
Query Conservation																				.	.	.	.	.	.	.	.	.																																									.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation
Template Sequence		D	E	L	L	Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K
Template Known Secondary structure								S	S	S			T	T						T	S	S		S	S	S			T	G	G	G	T										T	T	S	S												T	T									S		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		159	160	.	.	.	.	.	.	.			.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.		.	.																.	.																				.	.																	.	.
Query SS confidence											.	.		.	.																.	.																				.	.																	.	.
Query Sequence		I	D	E	T	P	D	F	G	A	.	.	D	.	.	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	.	.	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	.	.	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	.	.	N	I	A	C	P	S	I	L	D	Y
Query Conservation											.	.		.	.																.	.																				.	.																	.	.
Alig confidence											.	.		.	.																.	.																				.	.																	.	.									.	.
Template Conservation																																																																																.	.
Template Sequence		I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V	E	R	I	E	P	T	E	V	G	A	D	I	I	A	G	S	L	I	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	R	L	T	T	P	G	I	G	.	.
Template Known Secondary structure														T	T	S							T	T	T	T	T	T	S	S			G	G	G	T	T		S									T	T	T	T	T			S																			S		T	T	T	G	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	L	.	.	.	.	.	.	A	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	S	K	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	G	G					T	T												.	.	.	.	.	.																						T	T					S		T	T	S			S	S	S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
										260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	L	F	L	E	E	S	F	A	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	X	I	A	F	A	Q	A	I	Q	A	A	S
Template Known Secondary structure													T	S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions