Job Description P23721 Confidence 99.83% Date Thu Jan 5 11:39:37 GMT 2012 Rank 175 Aligned Residues 286 % Identity 13% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.														.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																		.	.																																																				.	.
Template Sequence		S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	.	.	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L	.	.	L	Q	T	L	G	F	E	L	L
Template Known Secondary structure											T	T	S		G	G	G	.	.					S	S																T			T	T		S	S		G	G	G	G									S									.	.					T
Template Predicted Secondary structure																		.	.																																																				.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																	.	.	.																	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence																																	.	.	.																	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	.	.	.	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	.	.	.	.	.	.	.
Query Conservation																																	.	.	.																	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence										.																							.	.	.																	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		T	V	D	X	Q	S	D	G	.	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D	A	Y	R	V	H	H	L	V	E	E	D	R	A	E
Template Known Secondary structure							T	T		.												S		T	T								S	S	S		T	T	T														T				S	S	T	T								T	T	S	S		B			S	S	S
Template Predicted Secondary structure										.
Template SS confidence
		149	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
											183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	.	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V
Query Conservation		.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.	.																						.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V	K	F
Template Known Secondary structure													T		T	T	S							S	T	T	T	S		S	S	S	S																					.	.	.	.	.	.	.	.	.	.	.	.	S		S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.													280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		253	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure				.	.	.																													.	.	.	.	.
Query SS confidence				.	.	.																													.	.	.	.	.
Query Sequence		F	K	.	.	.	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	.	.	.	.	.	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A
Query Conservation				.	.	.																													.	.	.	.	.
Alig confidence				.	.	.						.																							.	.	.	.	.										.	.	.														.
Template Conservation												.																																					.	.	.														.
Template Sequence		L	T	E	Y	P	G	G	L	E	G	.	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	.	.	.	K	G	G	Y	F	I	S	L	D	T	A	E	P	.	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L
Template Known Secondary structure					S	T	T					.																									T	T	T	T	S	S							.	.	.	S	B	S	S							S	S	S	.												T	T
Template Predicted Secondary structure												.																																					.	.	.														.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		325	.	.	.	.	330	.									.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		L	K	G	H	R	V	V	.	.	.	.	.	.	.	.	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.											.
Template Conservation																											.
Template Sequence		T	P	A	G	A	T	Y	P	A	G	Q	D	P	H	N	R	N	L	R	L	A	P	T	R	P	.	P	V	E	E	V	R	T	A	X	Q	V	V	A	A	C	I	R	L
Template Known Secondary structure				T	T	T	T	S	S	T	T			S	S	S								S	S	S	.
Template Predicted Secondary structure																											.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions