Job Description P23721 Confidence 99.88% Date Thu Jan 5 11:39:37 GMT 2012 Rank 147 Aligned Residues 336 % Identity 12% Template c3eleB_ PDB info PDB header:transferase Chain: B: PDB Molecule:amino transferase; PDBTitle: crystal structure of amino transferase (rer070207001803) from2 eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q
Query Conservation											.	.
Alig confidence											.	.																																										.	.	.
Template Conservation																																																						.	.	.
Template Sequence		E	N	V	Y	D	F	S	I	G	N	P	S	I	P	A	P	Q	I	V	N	D	T	I	K	E	L	V	T	D	Y	D	S	V	A	L	H	G	Y	T	S	A	Q	G	D	V	E	T	R	A	A	I	A	.	.	.	E	F	L	N	N	T	H	G	T	H	F	N	A	D	N	L	Y	X	T	X	G	A	A	A	S
Template Known Secondary structure		G	G											S																	S							S				T	T											.	.	.													G	G	G					S	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure														.																																				.
Query SS confidence														.																																				.
Query Sequence		F	A	A	V	P	L	N	I	L	G	D	K	.	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	.	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I
Query Conservation														.																																				.
Alig confidence														.																	.	.																		.
Template Conservation																															.	.
Template Sequence		L	S	I	C	F	R	A	L	T	S	D	A	Y	D	E	F	I	T	I	A	P	Y	F	P	E	Y	K	V	F	.	.	V	N	A	A	G	A	R	L	V	E	V	P	A	D	T	E	H	F	Q	I	D	F	D	A	L	E	E	R	I	N	A	H	T	R	G	V	I	I	N	S	P	N	N	P	S	G	T	V	Y
Template Known Secondary structure												S	T	T							S	S			T	T					.	.				T	T										T	T	T	S	S									T			T	T								S	S		T	T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.						.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.				.	.	.	.	.	.														.	.	.	.	.	.	.																								.	.
Query SS confidence										.	.	.	.	.				.	.	.	.	.	.														.	.	.	.	.	.	.																								.	.
Query Sequence		A	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	.	.	.	.	.	.	V	V	V	A	A	D	F	S	S	T	I	L	S	.	.	.	.	.	.	.	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	I	V	I	V	R	E	D	L	L	G	K
Query Conservation										.	.	.	.	.				.	.	.	.	.	.														.	.	.	.	.	.	.																								.	.
Alig confidence										.	.	.	.	.				.	.	.	.	.	.														.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		S	E	E	T	I	K	K	L	S	D	L	L	E	K	K	S	K	E	I	G	R	P	I	F	I	I	A	D	E	P	Y	R	E	I	V	Y	D	G	I	K	V	P	F	V	T	K	Y	Y	D	N	T	L	V	C	Y	S	Y	S	K	S	L	S	L	P	G	E	R	I	G	Y	V	L	V	P	D	E	V	Y	D	K
Template Known Secondary structure																					T	S									T	T	T	T		B		T	T						G	G	G	T		S	S							S	T	T	T	S	S		G	G	G									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template Sequence		A	E	L	Y	A	A	V	.	.	.	.	.	.	.	.	.	.	.	.	C	G	A	G	R	A	L	G	Y	V	C	A	P	S	L	F	Q	K	X	I	V	K	C	Q	G	A	T	G	D	I	N	A	Y	K	E	N	R	D	L	L	Y	E	G	L	T	R	I	G	Y	H	C	F	K	P	D	.	.	.	.	.	G
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.							T	T				S									T	T		T	T																							T							S	.	.	.	.	.	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.													.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	.	.	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R	H
Query Conservation																																.	.
Alig confidence																																.	.													.	.
Template Conservation																																														.	.
Template Sequence		A	F	Y	X	F	V	K	A	L	E	D	D	S	N	A	F	C	E	K	A	K	E	E	D	V	L	I	V	A	A	D	G	F	G	C	P	G	W	V	R	I	S	Y	C	.	.	V	D	R	E	X	I	K	H	S	X	P	A	F	E	K	I	Y	K	K	Y
Template Known Secondary structure		S	S							S	S	S												T	T						G	G	G	G	T		T	T								.	.	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions