Job Description P23721 Confidence 99.93% Date Thu Jan 5 11:39:37 GMT 2012 Rank 86 Aligned Residues 307 % Identity 11% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		V	E	L	I	A	S	E	N	I	V	S	R	A	V	L	D	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	.	.	.	G	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M
Template Known Secondary structure						T	T													T	S	G	G	G	S	S		T	T			.	.	.	.	.	.	.	.	.	.	.	.															T	T		.	.	.	S							S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		L	A	L	A	K	P	G	D	T	V	L	G	M	S	L	F	N	A	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	.	S	L	I	I	A	G	F	S	A	Y	P	R	K	L	D	F	A	R	F	R	A
Template Known Secondary structure							T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		T	T	T		S	B															.	S							S			S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		165			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																	.	.	.	.	.
Query SS confidence			.	.																	.	.	.	.	.
Query Sequence		F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	.	.	.	.	.	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M
Query Conservation			.	.																	.	.	.	.	.
Alig confidence			.	.																	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	H	A	H	V	V	T	S	T	T	H	K	T	L	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure						T	T								T	T	T						T	T	S	S			G	G	G	T		S						S	S	G	G	G		S		S							S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S
Query Conservation
Alig confidence																								.																																		.	.
Template Conservation																								.																																		.	.
Template Sequence		A	V	G	P	L	M	H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	.	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	V	D	L	V	T	G	G	T	D	.	.	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L
Template Known Secondary structure																					T	S		.																							T	T				G	G	G	S		S	.	.	S	S							G	G	G	T
Template Predicted Secondary structure																								.																																		.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		318	.	320	.	.	.	.	.	.	.									.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure												.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		F	A	A	G	L	H	A	L	K	G	.	.	.	.	.	.	.	.	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	.	.	.	.	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation												.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A
Template Known Secondary structure				T	T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions