Return to main results Retrieve Phyre Job Id

Job DescriptionP23721
Confidence99.81%DateThu Jan 5 11:39:37 GMT 2012
Rank186Aligned Residues278
% Identity15%Templatec3e6gA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  AEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLR
Query Conservation      
  

   
      

  




 
           

 
                   
               
Alig confidence 















....














.





















..



















Template Conservation     

  

   
 
 ....
    

  
  
 
.  
  

 

            ..      
   
        
Template Sequence  RFAYERCVAALEGGTR. . . . AFAFASGMAATSTVM. ELLDAGSHVVAMDDLYGGTFRL. . FERVRRRTAGLDFSFVDLTD
Template Known Secondary structure  T
S....SS.TTS
TT
SS

..


TT
Template Predicted Secondary structure 


....

.









..







Template SS confidence 















































































   66...70.........80. ........90...... ...100.........110........ .120.........130........
 
   130.........140.........150.........160..... ....170.........180........ .190.........200....
Predicted Secondary structure 
















..

















.










..
Query SS confidence 



































. .






















.















. .
Query Sequence  AVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDF. . GADVVVAADFSSTILSRPIDVSR. YGVIYAGAQKNIGPAG. .
Query Conservation                  
      

       
   ..       

 
   
        . 
    
  
  

 
..
Alig confidence 



































..






















.















..
Template Conservation             
  
 
    
  
    
  
   
   
  

 
 
 
          
 
    
  
   
    
Template Sequence  PAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDM
Template Known Secondary structure 

TTSS
TTT




TT

SSS
TTT

GGGGT
STTTTTT
SSS
Template Predicted Secondary structure 

































Template SS confidence 















































































   139140.........150.........160.........170.........180.........190.........200.........210........
 
   205....210 .........220.........230.........240.........250.........260.........270.........280.
Predicted Secondary structure  ...























Query SS confidence  .





. .






































































Query Sequence  . LTIVIV. . REDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVID
Query Conservation  . 
 
  ..                             
     
  
  

       
          
   
   
 
Alig confidence  .





..













............

















......




















Template Conservation    
                    ............ 
       
        ...... 
  
          
   
 
Template Sequence  VGGIAVVGDNAELAEQMAFLQNS. . . . . . . . . . . . IGGVQGPFDSFLALRGLK. . . . . . TLPLRMRAHCENALALAQWLE
Template Known Secondary structure 


S
............

B

T......T
Template Predicted Secondary structure 






............





......
Template SS confidence 















































































   219220.........230.........240. ........250......... 260.........270.........280
 
   282.......290..... ....300...... ...310.........320.........330
Predicted Secondary structure 









..............




.











................
Query SS confidence 













. . . . . . . . . . . . . .










.























. . . . . . . . . . . . . . . .
Query Sequence  NSDFYRNDVAKANR. . . . . . . . . . . . . . SRMNVPFQLAD. SALDKLFLEESFAAGLHALKGHRV. . . . . . . . . . . . . . . .
Query Conservation                ..............
   
 
    .          
   

    
   ................
Alig confidence 













..............










.























................
Template Conservation              
   
          
   
                  
    
  
 
   

              
Template Sequence  THPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPV
Template Known Secondary structure  T
TT
TTSTTSTT
SS

STT
SSS
S



SS

TTTTTT
SS

Template Predicted Secondary structure 











































Template SS confidence 















































































   281........290.........300.........310.........320.........330.........340.........350.........360
 
   331........340.........350......
Predicted Secondary structure  .........







Query SS confidence  . . . . . . . . .

























Query Sequence  . . . . . . . . . VGGMRASIYNAMPLEGVKALTDFMVE
Query Conservation  ......... 
 



     
 


  

  
 
Alig confidence  .........









....











Template Conservation        

    



 

....
  
 

  
  
Template Sequence  ARREQLGISDALVRLSVGI. . . . EDLGDLRGDLER
Template Known Secondary structure  TTTTTSS

SS

S....S
TT
Template Predicted Secondary structure 






....


Template SS confidence 


































   361........370......... 380.........390.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions