Job Description P23721 Confidence 99.94% Date Thu Jan 5 11:39:37 GMT 2012 Rank 72 Aligned Residues 333 % Identity 11% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Q	I	F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		F	D	Q	P	L	L	V	G	R	P	N	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	S	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	R	H	.	.	.	.	A	V	A	T	C	N	A	T	A	G	L
Template Known Secondary structure			S	S				T	T																					T			S	S	S		.	.	.	.	.	.	.	.	.	.	.	.															T	S	S		.	.	.	.					S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		2017	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.													.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.					2070	.	.	.	.	.	.	.	.	.	2080
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D
Query Conservation
Alig confidence									.																				.	.																												.	.
Template Conservation									.																				.	.																												.	.
Template Sequence		Q	L	L	A	H	A	A	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	A	.	.	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	.	.	A	V	T	P	R	T	S	A	V	V	G	V	H	L	W	G	R	P	C	A	A	D
Template Known Secondary structure									.	T			S						S	S	S		T						.	.				T	T								B		T	T	T	S	S	B		S	T	T				.	.				T	T									G	G	G
Template Predicted Secondary structure									.																				.	.																												.	.
Template SS confidence
		2081	.	.	.	.	.	.		.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.			.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.			.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.
		161	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure							.	.																					.	.	.	.	.																										.
Query SS confidence							.	.																					.	.	.	.	.																										.
Query Sequence		E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	.	.	.	.	.	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	.	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N
Query Conservation							.	.																					.	.	.	.	.																										.
Alig confidence							.	.																					.	.	.	.	.																										.
Template Conservation
Template Sequence		Q	L	R	K	V	A	D	E	H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G	G	S
Template Known Secondary structure											T								T	T		T	T				T	T			T	T	S	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		2156	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.
Predicted Secondary structure																																																																											.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.
Query Sequence		D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	.	.	.	.	.	D	S
Query Conservation																																																																											.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																														.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		P	A	G	G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	.	.	.	.	.	.	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E	A	T	T	G
Template Known Secondary structure		T	T				B		B															.	.	.	.	.	.																				T		S		T	T						G	G	G	G	S	B																S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		2236	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.							.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.																								.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R
Template Known Secondary structure		S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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