Job Description P23721 Confidence 99.74% Date Thu Jan 5 11:39:37 GMT 2012 Rank 214 Aligned Residues 324 % Identity 10% Template c2pb2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding Resolution 1.91 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.	.					.	.	.
Query SS confidence											.	.					.	.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	.	.	.	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation											.	.					.	.	.
Alig confidence											.	.					.	.	.																								.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		K	E	Y	I	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	E	A	L	K	S	Q	G	E	T	L	W	H	T	S	N	V	F	T	.	.	.	.	.	.	.	.	.	N	E	P	A	L	R	L	G	R	K	L	I	D	A	T	F	A	E	R	.	.	.	.	V	L	F	M	N	S	G
Template Known Secondary structure							S	S					T		T	T		B	S													T	T						T	T	S		.	.	.	.	.	.	.	.	.															S	S		S		.	.	.	.					S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		R	G	Q	F	A	A	V	P	.	.	.	.	.	.	.	.	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	.	.	.	.	.	.	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N
Query Conservation										.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C
Template Known Secondary structure																				T		T	T								T	T					S	S							S	S						T	T	S	S	S			S							T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																		.	.	.	.								.	.																.	.	.	.	.	.
Query SS confidence																		.	.	.	.								.	.																.	.	.	.	.	.
Query Sequence		A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	.	.	.	.	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	.	.	.	.	.	.	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V
Query Conservation																		.	.	.	.								.	.																.	.	.	.	.	.
Alig confidence																		.	.	.	.								.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	V	V	E	P	I	Q	G	E	G	G	V	Q	A	A	T	P	E	F	L	K	G	L	R	D	L	C	D	E	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	V	S	A	M	L	T
Template Known Secondary structure							S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	E	I	A	S	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	Q	G	I	H	T	K	R	Q	Q	F	V	Q	H	L	Q	A	I	D	E	Q	F	D	I	F	S	D	I	R
Template Known Secondary structure							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.																			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation
Alig confidence					.	.																																		.	.
Template Conservation					.	.																																		.	.
Template Sequence		G	M	G	.	.	L	L	I	G	A	E	L	K	P	K	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	.	.	A	D	V	M	R	F	A	P	S	L	V	V	E	E	A	D	I	H	E	G	M	Q	R	F	A	Q	A	V	G	K
Template Known Secondary structure				T	.	.	T								G	G	G	T	T												T	T						S	S	.	.	T	T								T	T
Template Predicted Secondary structure					.	.																																		.	.
Template SS confidence
		337	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions