Phyre 2 alignment of P23721 with c2ordA

Job Description P23721
Confidence 99.80% Date Thu Jan 5 11:39:37 GMT 2012

Rank 190 Aligned Residues 327

% Identity 11% Template c2ordA_

PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

Resolution 1.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10			.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure										.	.					.	.	.
Query SS confidence										.	.					.	.	.
Query Sequence	A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	.	.	.	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation										.	.					.	.	.
Alig confidence										.	.					.	.	.																								.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	H	C	S	N	L	F	W	.	.	.	.	.	.	.	.	.	N	R	P	Q	X	E	L	A	E	L	L	S	K	N	T	F	G	G	K	.	.	.	.	V	F	F	A	N	T	G
Template Known Secondary structure						S	S					T		T	T		B	T																S				T	T	S		.	.	.	.	.	.	.	.	.														T	T	T	S			.	.	.	.					S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
	28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.										.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.

	77	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence	R	G	Q	F	A	A	V	P	L	N	I	.	.	.	.	.	.	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	.	.	.	.	.	.	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A
Query Conservation												.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence	T	E	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V	E	D	L	R	R	K	X	S	E	D	V	C	A
Template Known Secondary structure																				T	T								B	T					S	S							S	B						G	G	G		S			T	T						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
	95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

	144	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																.	.	.	.								.	.																			.	.	.	.	.																.
Query SS confidence																.	.	.	.								.	.																			.	.	.	.	.																.
Query Sequence	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	.	.	.	.	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	.	.	.	.	.	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	.	N	I	G	P	A	G	L	T	I	V	I	V	R
Query Conservation																.	.	.	.								.	.																			.	.	.	.	.																.
Alig confidence																.	.	.	.								.	.																			.	.	.	.	.																.
Template Conservation
Template Sequence	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	L	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	T	T	A	K	G	L	G	G	G	V	P	I	G	A	V	I	V	N
Template Known Secondary structure					S				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	S	S						T				S						G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

	212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	R	A	N	V	L	E	P	G	D	H	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K	E	E	Y	D	V	V	A	D	V	R	G
Template Known Secondary structure	S	T	T					T	T	S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T																T	S	T	T																								T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	255	.	.	.	.	260	.	.	.	.	.	.	.	.														.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

	292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation
Alig confidence	.	.	.	.																																		.	.
Template Conservation	.	.	.	.																																		.	.
Template Sequence	.	.	.	.	X	G	L	X	I	G	I	Q	F	R	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	G	.	.	N	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D	L	A	V	E	T	L	K	K	V	L	Q	G
Template Known Secondary structure	.	.	.	.		T	T								T	T	S												T	T							T	.	.	T	T								T	T																			T
Template Predicted Secondary structure	.	.	.	.																																		.	.
Template SS confidence
					322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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