Job Description P23721 Confidence 100.00% Date Thu Jan 5 11:39:37 GMT 2012 Rank 32 Aligned Residues 346 % Identity 12% Template c2hdyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:selenocysteine lyase; PDBTitle: structure of human selenocysteine lyase Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	I	F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A
Query Conservation
Alig confidence																																									.	.	.																									.	.
Template Conservation																																									.	.	.																									.	.
Template Sequence		R	K	V	Y	M	D	Y	N	A	T	T	P	L	E	P	E	V	I	Q	A	M	T	K	A	M	W	E	A	W	G	N	P	S	S	P	Y	S	A	G	.	.	.	R	K	A	K	D	I	I	N	A	A	R	E	S	L	A	K	M	I	G	G	K	P	Q	D	.	.	I	I	F	T	S	G	G	T	E	S	N	N
Template Known Secondary structure							B	T	T	T																			S		S		T	T		S	S				.	.	.																			T			G	G	G	.	.					S
Template Predicted Secondary structure																																									.	.	.																									.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.
		82	.	.	.	.	.									.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure								.	.	.	.	.	.	.	.																			.	.																				.
Query SS confidence								.	.	.	.	.	.	.	.																			.	.																				.
Query Sequence		A	V	P	L	N	I	.	.	.	.	.	.	.	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	.	.	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	.	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P
Query Conservation								.	.	.	.	.	.	.	.																			.	.																				.
Alig confidence								.	.	.	.	.	.	.	.																			.	.																				.
Template Conservation
Template Sequence		L	V	I	H	S	V	V	K	H	F	H	A	N	Q	T	G	A	K	P	H	F	I	T	S	S	V	E	H	D	S	I	R	L	P	L	E	H	L	V	E	E	Q	V	A	A	V	T	F	V	P	V	S	K	V	S	G	Q	T	E	V	D	D	I	L	A	A	V	R	P	T	T	R	L	V	T	I	M	L	A	N
Template Known Secondary structure																										T	T															T	T	S										T	T	T	S	S									T			T	T								S	B
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	S	.	.	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		N	E	T	G	I	V	M	P	V	P	E	I	S	Q	R	I	K	A	L	N	Q	E	R	V	A	A	G	L	P	P	I	L	V	H	T	D	A	A	Q	A	L	G	K	Q	R	V	D	V	E	D	L	G	V	D	F	L	T	I	V	G	H	K	F	Y	G	P	R	I	G	A	L	Y	I	R	G	L	G	E	F	T
Template Known Secondary structure		T	T	T		B	B																				T	T											T	T	T	T	T	T	S										S						G	G	G	T	T	S		S							T	T	B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.
Predicted Secondary structure																																																																											.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.
Query Sequence		K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	.	.	.	.	.	V	A
Query Conservation																																																																											.	.	.	.	.
Alig confidence												.	.	.	.	.																													.	.																													.	.	.	.	.
Template Conservation												.	.	.	.	.																													.	.
Template Sequence		P	L	Y	P	M	L	F	G	G	G	.	.	.	.	.	Q	E	R	N	F	R	P	G	T	E	N	T	P	M	I	A	G	L	G	K	A	A	E	L	V	T	Q	N	.	.	C	E	A	Y	E	A	H	M	R	D	V	R	D	Y	L	E	E	R	L	E	A	E	F	G	Q	K	R	I	H	L	N	S	Q	F	P
Template Known Secondary structure						S			S	S		.	.	.	.	.	G	G	G	G	T	S		S																					.	.																									G	G	G				S	S			T
Template Predicted Secondary structure												.	.	.	.	.																													.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																							.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence		G	T	Q	R	L	P	N	T	C	N	F	S	I	R	G	P	R	L	.	Q	G	H	V	V	L	A	Q	C	R	V	L	M	A	S	V	G	A	A	C	H	S	D	H	G	D	Q	P	S	P	V	L	L	S	Y	G	V	P	F	D	V	A	R	N	A	L	R	L	S	V	G	R	S	T	T	R	A	E	V	D	L
Template Known Secondary structure		T			B		S	S									T	T		.										S	S				B	S	S	S	S			S	S		S	S									T	T								T								S	S
Template Predicted Secondary structure																				.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	F	M	V	E	F	E	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	Q	D	L	K	Q	A	V	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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