Job Description P23721 Confidence 99.94% Date Thu Jan 5 11:39:37 GMT 2012 Rank 73 Aligned Residues 336 % Identity 12% Template c2c7tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine-2-deoxy-scyllo-inosose PDBTitle: crystal structure of the plp-bound form of btrr,2 a dual functional aminotransferase involved in butirosin3 biosynthesis. Resolution 2.1 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	.
Query Conservation																																																																																	.
Alig confidence																																		.	.	.	.	.	.																				.	.	.	.																			.
Template Conservation																																		.	.	.	.	.	.																				.	.	.	.
Template Sequence		P	E	W	P	Q	H	S	D	R	T	R	R	K	I	E	E	V	F	Q	S	N	R	W	A	I	S	G	Y	W	T	G	E	.	.	.	.	.	.	E	S	M	E	R	K	F	A	K	A	F	A	D	F	N	G	V	P	Y	.	.	.	.	C	V	P	T	T	S	G	S	T	A	L	M	L	A	L	E	A	L	G
Template Known Secondary structure				S	S																	T			S	T	T	S	B			S	S	.	.	.	.	.	.																T		S		.	.	.	.					S													T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																					.																																												.
Query SS confidence																																					.																																												.
Query Sequence		L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	.	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.
Query Conservation																																					.																																												.
Alig confidence																						.	.														.																										.	.	.																.
Template Conservation																						.	.																																								.	.	.
Template Sequence		I	G	E	G	D	E	V	I	V	P	S	L	T	W	I	A	T	A	T	A	.	.	V	L	N	V	N	A	L	P	V	F	V	D	V	E	A	D	T	Y	C	I	D	P	Q	L	I	K	S	A	I	T	D	K	T	K	A	I	I	P	V	.	.	.	H	L	F	G	S	M	A	N	M	D	E	I	N	E	I	A
Template Known Secondary structure				T	T							S	S	S		T						.	.				T	T								B		T	T	T		S	B											T	T							B	.	.	.			T	T
Template Predicted Secondary structure																						.	.																																								.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																								.	.	.	.	.																																																			.
Query SS confidence		.																								.	.	.	.	.																																																			.
Query Sequence		.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	S	R	.	.	.	.	.	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	.
Query Conservation		.																								.	.	.	.	.																																																			.
Alig confidence		.																								.	.	.	.	.																																																			.
Template Conservation
Template Sequence		Q	E	H	N	L	F	V	I	E	D	C	A	Q	S	H	G	S	V	W	N	N	Q	R	A	G	T	I	G	D	I	G	A	F	S	C	Q	Q	G	K	V	L	T	A	G	E	G	G	I	I	V	T	K	N	P	R	L	F	E	L	I	Q	Q	L	R	A	D	S	R	V	Y	C	D	D	S	S	E	L	M	H	G
Template Known Secondary structure					T								T	T		T	T				T	T			T	T	S	S	S	S								T	T	S	S	S		S	S	S							S													B	T	T					S		T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
											239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																													.	.	.								.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																													.	.	.								.
Query Sequence		.	.	.	.	.	.	.	.	.	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	.	.	.	N	V	P	F	Q	L	A	.
Query Conservation		.	.	.	.	.	.	.	.	.																																																													.	.	.								.
Alig confidence		.	.	.	.	.	.	.	.	.																						.																																							.	.	.								.
Template Conservation																																.
Template Sequence		D	M	Q	L	V	K	K	G	D	I	Q	G	S	N	Y	C	L	S	E	F	Q	S	A	I	L	L	D	Q	L	Q	.	E	L	D	D	K	N	A	I	R	E	K	N	A	M	F	L	N	D	A	L	S	K	I	D	G	I	K	V	M	K	R	P	P	Q	V	S	R	Q	T	Y	Y	G	Y	V	F	R	F	D	P
Template Known Secondary structure			B	S						S	S				B																T	.	T																				T	T	S	T	T								T	T							S								G
Template Predicted Secondary structure																																.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
					306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.																																											330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	G	G	M	R	A	S	I	Y	N
Query Conservation		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	F	G	G	L	N	A	D	Q	F	C	E	I	L	R	E	K	L	N	M	G	T	F	Y	L	H	P	P	Y	L	P	V	H	K	N	P	L	F	C	P	W	T	K	N	R	Y	L	K	S	V	R	K	T	E	A	Y	W	R	G	L	H	Y	P	V	S	E	R	A	S	G	Q	S	I	V	I	H	H	A	I
Template Known Secondary structure		G	G	T	T	T															T			T	T	T								G	G	G		T	T			G	G	G		T	T	S													T										T	T	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		341	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	M	P	.	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		L	L	A	E	P	S	H	L	S	L	L	V	D	A	V	A	E	L	A	R	K
Template Known Secondary structure		G	G	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions