Job Description P23721 Confidence 99.87% Date Thu Jan 5 11:39:37 GMT 2012 Rank 158 Aligned Residues 306 % Identity 13% Template c2a7vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: human mitochondrial serine hydroxymethyltransferase 2 Resolution 2.04 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	.	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V
Query Conservation																																																													.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	L	I	A	S	E	N	F	C	S	R	A	A	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	L	A	V
Template Known Secondary structure						T	T													T	S	G	G	G	T						.	.	.	.	.	.	.	.	.	.	.	.		T														T	T			T	T	T								S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.													.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		Y	T	A	L	L	Q	P	H	D	R	I	M	G	Y	K	L	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	G	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	.	P	R	L	I	I	A	G	T	S	A	Y	A	R	L	I	D	Y	A	R	M	R
Template Known Secondary structure								S									B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	B														.		S							S	S			S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		164	.			.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																.	.	.	.	.	.	.	220	.
Predicted Secondary structure				.	.														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	.	.	.	.	.	I	L	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	G	K	A	N	I	A
Query Conservation				.	.														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I	P	S	P	F	K	H	A	D	I	V	T	T	T	T	H	K	T	L	R	G	A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N	F	A
Template Known Secondary structure							T	T								G	G	G						T	T	S	S			G	G	G	T		S						S	S	G	G	G		S		S									S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																								.																																		.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.																								.																																		.	.	.
Template Sequence		V	F	P	S	.	.	.	.	.	.	.	.	.	.	.	L	Q	G	G	P	H	N	H	A	I	A	A	V	A	V	A	L	K	Q	A	C	T	P	.	M	F	R	E	Y	S	L	Q	V	L	K	N	A	R	A	M	A	D	A	L	L	E	R	G	Y	S	L	V	S	G	G	T	D	.	.	.	N	H	L	V	L
Template Known Secondary structure			T	T	T	.	.	.	.	.	.	.	.	.	.	.	T			S																		S		.																							T	T				G	G	G	S		S	.	.	.	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																								.																																		.	.	.
Template SS confidence
		303	.	.	.												.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.
		302	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.								.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure									.																				.	.	.	.	.	.	.																.	.	.	.
Query SS confidence									.																				.	.	.	.	.	.	.																.	.	.	.
Query Sequence		F	Q	L	A	D	S	A	.	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	.	.	.	.	.	.	.	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	.	.	.	.	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation									.																				.	.	.	.	.	.	.																.	.	.	.
Alig confidence									.																				.	.	.	.	.	.	.																.	.	.	.
Template Conservation
Template Sequence		V	D	L	R	P	K	G	L	D	G	A	R	A	E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	G	D	R	S	A	I	T	P	G	G	L	R	L	G	A	P	A	L	T	S	R	Q	F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G	V	N	I
Template Known Secondary structure					T	T	T	T													T	T									T	T				S	S	S		S						S						T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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