Job Description P23721 Confidence 99.76% Date Thu Jan 5 11:39:37 GMT 2012 Rank 210 Aligned Residues 314 % Identity 12% Template c1z7dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:ornithine aminotransferase; PDBTitle: ornithine aminotransferase py00104 from plasmodium yoelii Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.	.					.	.	.
Query SS confidence											.	.					.	.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	.	.	.	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation											.	.					.	.	.
Alig confidence											.	.					.	.	.																								.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		K	R	Y	Y	D	F	L	S	A	Y	S	S	V	N	Q	G	H	C	H	P	N	I	L	N	A	M	I	N	Q	A	K	N	L	T	I	C	S	R	A	F	F	.	.	.	.	.	.	.	.	.	S	V	P	L	G	I	C	E	R	Y	L	T	N	L	L	G	Y	D	K	.	.	.	.	V	L	M	M	N	T	G
Template Known Secondary structure							S	S					T	T	T	T		B	T													T	T		S				T	T	S		.	.	.	.	.	.	.	.	.																T		S		.	.	.	.					S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	A	N	E	T	A	Y	K	L	C	R	K	W	G	Y	E	V	K	K	I	P	E	N	M	A	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	C	F	S	K	V	P	Y	D	D	L	E	A	L	E	E	E	L	K	D	P	N	V	C	A	F	I	V	E	P	I	Q	G	E	A	G	V
Template Known Secondary structure																			T	S				T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T										T	S	T	T								S	S	B	S	T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.															140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		157	.						.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure				.	.	.	.	.								.	.															.	.	.	.	.																										.	.
Query SS confidence				.	.	.	.	.								.	.															.	.	.	.	.																										.	.
Query Sequence		I	A	.	.	.	.	.	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	.	.	.	.	.	L	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C
Query Conservation				.	.	.	.	.								.	.															.	.	.	.	.																										.	.
Alig confidence				.	.	.	.	.								.	.															.	.	.	.	.																										.	.
Template Conservation
Template Sequence		I	V	P	S	D	N	Y	L	Q	G	V	Y	D	I	C	K	K	Y	N	V	L	F	V	A	D	E	V	Q	T	G	L	G	R	T	G	K	L	L	C	V	H	H	Y	N	V	K	P	D	V	I	L	L	G	K	A	L	S	G	G	H	Y	P	I	S	A	V	L	A	N	D	D	I	M	L	V	I	K	P	G	E
Template Known Secondary structure		B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.
Template Sequence		H	G	.	.	.	.	.	.	.	.	.	.	.	.	S	T	Y	G	G	N	P	L	A	A	S	I	C	V	E	A	L	N	V	L	I	N	E	K	L	C	E	N	A	E	K	L	G	G	P	F	L	E	N	L	K	R	E	L	K	D	S	K	I	V	R	D	V	R	G	.	.	.	.	K	G	L	L	C	A	I
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.				T	T																		T	T																				T	T	T		T	T							.	.	.	.		T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.
Template SS confidence
		288	.													290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.
		303	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Q	L	A	.	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation					.
Alig confidence					.																											.	.
Template Conservation																																.	.
Template Sequence		E	F	K	N	E	L	V	N	V	L	D	I	C	L	K	L	K	E	N	G	L	I	T	R	D	V	H	D	K	T	.	.	I	R	L	T	P	P	L	C	I	T	K	E	Q	L	D	E	C	T	E	I	I	V	K	T	V	K	F
Template Known Secondary structure					T	T	T													T	T							T	T	T		.	.							T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions