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Job DescriptionP23721
Confidence99.83%DateThu Jan 5 11:39:37 GMT 2012
Rank177Aligned Residues291
% Identity13%Templatec1ynuA_
PDB info PDB header:lyaseChain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60. ........70.........80.........90.........100.........110.........120.....
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Query Sequence  EAEKDFRDLL. . . . . . NVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTV
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Template Sequence  AFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG. . FDRDLKWRTGVEIVPIHCTS
Template Known Secondary structure  TTTSS


GGG

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   90.........100.........110.........120.........130.........140....... ..150.........160.......
 
   126 ...130......... 140.........150.........160..... ....170.........180..
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Query Sequence  D. . . GLRAVKPMREWQL. . . . . . SDNAAYMHYCPNETIDGIAIDETPDF. . . . . GADVVVAADFSSTILSR. . . . . . . . .
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Template Sequence  SNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVM
Template Known Secondary structure  GGTT


TT

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TTT




T

TTGGG

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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   183......190.........200.... .....210.........220.........230.........240.........250......
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Query Sequence  . . . . PIDVSRYGVIYAGAQKNIGPAG. . LTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWL
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Template Sequence  EVLKDSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG. . . . . . . . . . LVSSQTQHLLSAMLSDKKLT
Template Known Secondary structure  TT


GGGGSSSSS

GGG
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TT
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   248.250.........260.........270.........280.........290....... ..300.........310.......
 
   257..260.........270.........280.........290.........300.........310 .........320.........
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Query Sequence  KANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALD. . . . . . . KLFLEESFAAGLHALKGHR
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Template Sequence  KNY. . IAENHKRLKQRQKKLVSGLQKSGISCLNGN. . . . AGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSS
Template Known Secondary structure  ..TTT




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   324.. ...330.........340.........350...... ...360.........370.........380.........390.......
 
   330 .........340.........350.........360.
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Query Sequence  V. . . . VGGMRASIYNAMPLEGVKALTDFMVEFERRH
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Template Sequence  CHCTEPGWFRVCFA. NLPERTLDLAMQRLKAFVGEY
Template Known Secondary structure  TT
SSTT
S.SS
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   398.400.........410. ........420.........430..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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