Job Description P23721 Confidence 56.78% Date Thu Jan 5 11:39:37 GMT 2012 Rank 238 Aligned Residues 49 % Identity 8% Template c1uv7A_ PDB info PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R	H	G
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		N	Q	V	I	T	N	S	T	R	Q	F	N	I	E	L	I	R	V	Q	P	R	G	E	X	X	Q	V	W	I	.	.	.	.	Q	P	L	P	F	S	Q	L	V	S	W	I	A	Y	L	Q	E	R	Q	G
Template Known Secondary structure													T										S	S							.	.	.	.			B																S
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions