Job Description P0CF55 Confidence 99.67% Date Thu Jan 5 11:31:09 GMT 2012 Rank 11 Aligned Residues 131 % Identity 17% Template d1hyva_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.70

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	C	S	D	G	F	E	F	C	C	D	N	G	E	R	L	R	V	T	F	A	L	D	C	C	D	R	E	A	L	H	W	A	V	T	T	G	G	F	N	S	E	T	V	Q	D	V	M	L	G	A	V	E	R	R	F	G	N	D	L	P	S	S	P	V	E	W	L	T	D	N	G	S	C	Y	R	A	N	E
Query Conservation
Alig confidence							.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Sequence		I	W	Q	L	D	.	.	.	.	.	.	T	H	L	E	G	K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	.	.	.	.	.	.	.	.	.	W	P	V	K	T	V	H	T	D	N	G	S	N	F	T	S	T	T
Template Known Secondary structure							.	.	.	.	.	.				T	T									T	T	T									S	S																	.	.	.	.	.	.	.	.	.	S								S		G	G	G	G		S
Template Predicted Secondary structure							.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	F	A	R	M	L	G	L	E	P	K	N	T	A	V	R	S	P	E	S	N	G	I	A	E	S	F	V	K	T	I	K	R	D	Y	I	S	I	M	P	K	P	D	G	L	T	A	A	K	N	L	A	E	A	F	E	H	Y	N	E	W	H	P	H	S	A	L	G	Y	R	S	P	R	E	Y	L	R	Q
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																															.	.																								.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																															.	.																								.	.	.	.
Template Sequence		V	K	.	.	.	.	.	.	.	.	A	A	W	W	A	G	I	K	Q	E	F	G	Q	G	V	I	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	.	.	R	D	Q	A	E	H	L	K	T	A	V	Q	M	A	V	F	I	H	N	K	K	R	K	.	.	.	.	G	G	Y	S	A	G	E	R	I	V	D
Template Known Secondary structure				.	.	.	.	.	.	.	.				T	T																										.	.	G	G	G	S	S	S																		.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																															.	.																								.	.	.	.
Template SS confidence
		126	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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