Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF55
Confidence73.75%DateThu Jan 5 11:31:09 GMT 2012
Rank343Aligned Residues29
% Identity10%Templatec3mkyP_
PDB info PDB header:dna binding protein/dnaChain: P: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10. ........20.........30...
Predicted Secondary structure 

..





Query SS confidence 






. .





















Query Sequence  RALIARG. . WGVSLVSRCLRVSRAQLHVILR
Query Conservation 
 
   
.. 

  

   



 


    
Alig confidence 






..





















Template Conservation     
      

  

   
 


 

  
 
Template Sequence  ASRLQNEFAGNISALADAENISRKIITRCIN
Template Known Secondary structure  TTTTT
TS
Template Predicted Secondary structure 






Template SS confidence 






























   168.170.........180.........190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions