Job Description P0CF55 Confidence 94.05% Date Thu Jan 5 11:31:09 GMT 2012 Rank 43 Aligned Residues 56 % Identity 9% Template c3bs3A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis Resolution 1.65 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		M	D	S	A	R	A	L	I	A	R	.	G	W	G	V	S	L	V	S	R	C	L	R	V	S	R	A	Q	L	H	V	I	L	R	R	T	D	D	W	M	D	G	R	R	S	R	H	T	D	D	T	D	V	L	L	R	I	H	H	V	I	G	E	L	P	T	Y
Query Conservation												.
Alig confidence												.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	R	I	K	V	V	L	A	E	K	Q	R	T	N	R	W	L	A	E	Q	X	G	K	S	E	N	T	I	S	R	W	C	S	.	.	.	.	.	.	.	.	.	.	N	K	S	Q	P	S	L	D	X	L	V	K	V	A	E	L	L	N	V	D	P	R	Q
Template Known Secondary structure			B									T	T											T											T	.	.	.	.	.	.	.	.	.	.	T	S	S															T	S		G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.											.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions