Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI3
Confidence97.27%DateThu Jan 5 11:13:00 GMT 2012
Rank238Aligned Residues122
% Identity27%Templated1v5wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   181........190.........200......... 210.........220 .....
Predicted Secondary structure 













.........


..........................
Query SS confidence 




























. . . . . . . . .










. . . . . . . . . . . . . . . . . . . . . . . . . .




Query Sequence  GGKIPKGVLMVGPPGTGKTLLAKAIAGEA. . . . . . . . . KVPFFTISGSD. . . . . . . . . . . . . . . . . . . . . . . . . . FVEMF
Query Conservation 
   
 



 







 

 


 
 .........      

 
 ..........................     
Alig confidence 




























.........










..........................




Template Conservation 

  
    
 
  




 
  
                 
  
  
       
                        
Template Sequence  GIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAY
Template Known Secondary structure  SB
SS

TT
TTTS
BTTTB


SSS


TT

T

Template Predicted Secondary structure 



































Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   226...230.........240 .........250.........260.........270.........280.........290.........300..
Predicted Secondary structure 


...























Query SS confidence 














. . .





























































Query Sequence  VGVGASRVRDMFEQA. . . KKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDV
Query Conservation   
     
   
  
...    
 







 
   
              
  

  


      



 


    
Alig confidence 














...






















.





































Template Conservation                            


 
          .          
      
  

    
 
         
Template Sequence  TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSG. RGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMGHI
Template Known Secondary structure  STTS
SSTSGGG

G.GG
T




T
Template Predicted Secondary structure 











.













Template SS confidence 















































































   195....200.........210.........220.........230..... ....240.........250.........260.........270...
 
   303
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  L
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   293
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions