Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI3
Confidence99.88%DateThu Jan 5 11:13:00 GMT 2012
Rank50Aligned Residues220
% Identity23%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170.........180.........190.........200....... ..210........
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Query Sequence  QIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG. . . . . . . EAKVPFFTISG
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Template Sequence  RPVFPFSAIVGQEDMKLALLLTAV. . . . . . . . . . . . DPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNV
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GGGS
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   18.20.........30.........40. ........50.........60.........70.........80.....
 
   219220.........230. ........240...... ...250.........260.....
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Query Sequence  SDFVEMFVGVGAS. . . . . . . . . . . . . . . . . . . . . . . . . RVRDMFEQAKKAAPC. . . . . . . . IIFIDEIDAVGRQRGAGLG
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Template Sequence  EMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDH. . . . . .
Template Known Secondary structure  GGS
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   86...90.........100.........110.........120.........130.........140.........150.........
 
   266...270.........280....... ..290.........300.. .......310.........320.. .......330..
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Query Sequence  GGHDEREQTLNQMLVEMDGFEG. . . . . . . . . . . NEGIIVIAATNRPDV. LDPALLRPGRFDRQVVVGLP. DVRGREQILK
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Template Sequence  . . . . . . . . IVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD. . RFGLSVEVLSPRDVETRVEVIR
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TT




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   160.........170.........180.........190.........200....... ..210.........220.........
 
   333... ...340..... ....350.........360.........370.........
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Query Sequence  VHMR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVPLAPDID. . AAIIARGTPGFSGADLANLVNEAALFAARGNKRV
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Template Sequence  RRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATA
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   230.........240.........250.........260.........270.........280.........290.........300.........
 
   380.........390...
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Query Sequence  VSMVEFEKAKDKIM
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Template Sequence  VGRDHLKRVATMAL
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   310.........320...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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