Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI3
Confidence99.87%DateThu Jan 5 11:13:00 GMT 2012
Rank53Aligned Residues230
% Identity15%Templated1fnna2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160......... 170.........180.........190.........200......... 210.........220
Predicted Secondary structure 






.















....


Query SS confidence 























.







































. . . .










Query Sequence  QIKTTFADVAGCDEAKEEVAELVE. YLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA. . . . KVPFFTISGSD
Query Conservation       
 

 
    
  
 


 . 
         
   
 



 







 

 


 
 ....      

 
 
Alig confidence 























.




.......



























....










Template Conservation       
  
 

      
   
       .......      


 

 
 


 
    
  
          
    
Template Sequence  SPSYVPKRLPHREQQLQQLDILLGNWLRNP. . . . . . . GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFI
Template Known Secondary structure  STT


S

TT
ST.......TSS



TTSSTTS


TTT
Template Predicted Secondary structure 












.......















Template SS confidence 















































































   10.........20.........30......... 40.........50.........60.........70.........80..
 
   221.. ......230.........240.........250.........260.........270.........280..
Predicted Secondary structure  ..................

















Query SS confidence 


. . . . . . . . . . . . . . . . . .


























































Query Sequence  FVE. . . . . . . . . . . . . . . . . . MFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEM
Query Conservation     ..................   
     
   
  
    
 







 
   
              
  

  
Alig confidence 


..................
































...........














Template Conservation                
                                 
     ...........               
Template Sequence  YRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNL. . . . . . . . . . . APDILSTFIRLGQEA
Template Known Secondary structure 

STT



SS


TT

TGGGS...........
TT
Template Predicted Secondary structure 











...........


Template SS confidence 















































































   83......90.........100.........110.........120.........130...... ...140.........150.
 
   283......290.........300 .........310.........320.........330.........340..... ....350......
Predicted Secondary structure 









...






















...



Query SS confidence 

















. . .












































. . .










Query Sequence  DGFEGNEGIIVIAATNRP. . . DVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDID. . . AAIIARGTPGF
Query Conservation 

      



 


  ...  

 








  
 
  
    
  

   
         
...
  

  
 
 
Alig confidence 






.









...









.

































...










Template Conservation         .   
                   .                  

                    
       
Template Sequence  DKLGAFR. IALVIVGHNDAVLNNLDPSTRGI. MGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQ
Template Known Secondary structure  SS

.SSTTS
.TT




BB
TTSS
SBS
Template Predicted Secondary structure 






.



.













Template SS confidence 















































































   152...... .160.........170.........180. ........190.........200.........210.........220.........
 
   357..360.........370.........380.........390.....
Predicted Secondary structure  ........









Query SS confidence  . . . . . . . .






































Query Sequence  . . . . . . . . SGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMG
Query Conservation  ........




  
   

  
 
     
   
   
   
  
Alig confidence  ........






































Template Conservation         
  
    

  
   
       

 


  
   
  
Template Sequence  TPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFG
Template Known Secondary structure  STT
TTS

TT
SS

S

Template Predicted Secondary structure 














Template SS confidence 














































   230.........240.........250.........260.........270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions