Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI3
Confidence99.97%DateThu Jan 5 11:13:00 GMT 2012
Rank26Aligned Residues226
% Identity19%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.........210.........220.. .......230..
Predicted Secondary structure 




















.



Query SS confidence 




































































.









Query Sequence  VAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV. EMFVGVGASR
Query Conservation 
 
    
  
 


  
         
   
 



 







 

 


 
       

 
   .    
     
Alig confidence 


















..















































.









Template Conservation            
        ..            



 







 

  

       
 
                 
Template Sequence  IIKWGDPVTRVLDDGELLV. . QQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQA
Template Known Secondary structure 



S..
SS
S
STTSST
S
GGG
TT

Template Predicted Secondary structure 




..

























Template SS confidence 















































































   515....520.........530... ......540.........550.........560.........570.........580.........590..
 
   233......240.........250.........260.........270.........280........ .290.........300.........310.
Predicted Secondary structure 


















.









Query SS confidence 























































.






















Query Sequence  VRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN. EGIIVIAATNRPDVLDPALLRPG
Query Conservation 
   
  
    
 







 
   
              
  

  


    .  



 


    

 





Alig confidence 




































....














.




















.
Template Conservation      
  
      

 




 
             ....    
             



 


    
    
 . 
Template Sequence  MKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNL. . . . VLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML. N
Template Known Secondary structure  TSS

TT
BTTTTB

....TT


STT
S
TT
T.T
Template Predicted Secondary structure 







....















.
Template SS confidence 















































































   593......600.........610.........620......... 630.........640.........650.........660...... .
 
   312.......320.........330.........340.........350......... 360.........370.........380.........390
Predicted Secondary structure 






















.






Query SS confidence 















































.






























Query Sequence  RFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGA. DLANLVNEAALFAARGNKRVVSMVEFEKAKD
Query Conservation 


  
 
  
    
  

   
         

  

  
 
 


.

  
   

  
 
     
   
   
  
Alig confidence 


























...

















.






..





















Template Conservation 

   
  
       
   
      ...       
            

 
  ..  
              
  
 
Template Sequence  AFSTTIHVPNIATGEQLLEALELLGNF. . . KDKERTTIAQQVKGKKVWIGIKKLLM. . LIEMSLQMDPEYRVRKFLALLR
Template Known Secondary structure  TSS


T
S...
TTS
..TTS
GGG
Template Predicted Secondary structure 











...








..


Template SS confidence 















































































   668.670.........680.........690.... .....700.........710.........720 .........730.........740..
 
   391
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   743
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions