Job Description P0AAI3 Confidence 96.86% Date Thu Jan 5 11:13:00 GMT 2012 Rank 290 Aligned Residues 115 % Identity 18% Template c3thxB_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp Resolution 2.70 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.															.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																													.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	.	.	.	.	.	G	E	A	K	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	T	I	S	G	S	D	F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A
Query Conservation																													.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.							.
Template Conservation																																																										.	.	.	.	.	.							.
Template Sequence		L	S	E	D	S	E	R	V	M	I	I	T	G	P	N	M	G	G	K	S	S	Y	I	K	Q	V	A	L	I	T	I	M	A	Q	I	G	S	Y	V	P	A	E	E	A	T	I	G	I	V	D	G	I	F	T	R	M	.	.	.	.	.	.	S	T	F	M	E	E	.	L	T	D	T	A	E	I	I	R	K	A
Template Known Secondary structure				T	T	S								S																							T			B	S	S	S								S							.	.	.	.	.	.							.
Template Predicted Secondary structure																																																										.	.	.	.	.	.							.
Template SS confidence
		875	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930							.	.	.	.	.	.		.	.	.	940	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P	D	V	L	D	P	A	L	L	R	P	G	R	F	D	R
Query Conservation
Alig confidence		.	.												.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation		.	.												.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		.	.	T	S	Q	S	L	V	I	L	D	E	L	.	.	.	.	.	G	R	G	T	S	T	H	D	G	I	A	I	A	Y	A	T	L	E	Y	F	I	.	.	.	.	.	.	.	R	D	V	K	S	L	T	L	F	V	T	H	Y	P	P	V	C	E	L	E	K	N	Y	S	H	Q	V	G	N
Template Known Secondary structure		.	.		T	T							S	T	.	.	.	.	.	T	T	T	S																		.	.	.	.	.	.	.		T	T									S		G	G	G	G	G					T	T	T	T
Template Predicted Secondary structure		.	.												.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
				958	.	960	.	.	.	.	.	.	.	.						.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.								990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions