Job Description P0AAI3 Confidence 99.69% Date Thu Jan 5 11:13:00 GMT 2012 Rank 78 Aligned Residues 211 % Identity 14% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	.	.	.	.	.	K	V	P	F	F	T	I	S	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																													.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	.	.	.	.	.	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F
Template Known Secondary structure																	.	.	.	.	.	T	T												S																	T	T	T	T	T	S	S										T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.						.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
			221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.																				.	.
Query SS confidence		.																				.	.
Query Sequence		.	F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	.	.	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T
Query Conservation		.																				.	.
Alig confidence		.																				.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	L	Q	Y	F	E	K	W	I	S	.	.	S	K	N	S	K	L	S	I	I	C	V	G
Template Known Secondary structure				S																		S		G	G	G	S											S	S	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.		S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.														.	.	.	.	.	.	.	680	.	.	.			.	.	.	.	.	.	690	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.																														.	.	.	340	.	.	.	.	.
Predicted Secondary structure																				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	P	D	V	L	D	P	A	L	L	R	P	G	R	F	D	R	.	.	.	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	P	L	A	P	D	I	D
Query Conservation																				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																																																	.
Template Sequence		G	H	N	V	T	I	R	E	Q	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	.
Template Known Secondary structure			S	S									T						T	T																																			T	T											T	T													.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.			360	.	.	.	.	.	.	.	.	.	370	.	.	.	.										.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	I	A	R	G	T	P	G	F	S	G	A	.	.	D	L	A	N	L	V	N	E	A	A	L	F	A	A	R	.	.	.	.	.	.	.	.	.	G	N	K	R	V	V	S	M	V	E	F	E	K	A	K	D	K	I	M
Query Conservation																.	.																.	.	.	.	.	.	.	.	.
Alig confidence																.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D	F	V	R	K	G	G	L	Q	K	G	K	L	V	V	S	Q	E	X	V	P	R	Y	F	S	E	A	I
Template Known Secondary structure															S																							T	T			T	T					S					T
Template Predicted Secondary structure
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions