Job Description P0AAI3 Confidence 96.17% Date Thu Jan 5 11:13:00 GMT 2012 Rank 343 Aligned Residues 111 % Identity 14% Template c3r7wC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex Resolution 2.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.													210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.													.	.																	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.													.	.																	.	.	.	.	.
Query Sequence		K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	K	V	P	F	F	T	I	S	G	S	D	F	.	.	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	.	.	.	.	.	E	Q	A	K	K	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.													.	.																	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.													.	.																	.	.	.	.	.
Template Conservation
Template Sequence		P	L	G	S	K	L	L	L	X	G	R	S	G	S	G	K	S	S	X	R	S	I	I	F	S	N	Y	S	A	F	D	T	R	R	L	G	A	T	I	D	V	E	H	S	H	L	R	F	L	G	N	X	T	L	N	L	W	D	C	G	G	Q	D	V	F	X	E	N	Y	F	T	K	Q	K	D	H	I	F	Q	X
Template Known Secondary structure													T	T	S											S				T	T	G	G	G	G						S									T	T	T											S									T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P	D	V	L	D	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		V	Q	V	L	I	H	V	F	D	V	E	.	.	.	.	.	.	.	.	.	.	S	T	E	V	L	K	D	I	E	I	F	A	K	A	L	K	Q	L	R	K	Y	S	P	D	A	K	I	F	V	L	L	.	.	H	K	X	D	L	V	Q	L
Template Known Secondary structure											T	T	.	.	.	.	.	.	.	.	.	.		T	T																				T	T								.	.			T	T	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions