Job Description P0AAI3 Confidence 99.94% Date Thu Jan 5 11:13:00 GMT 2012 Rank 33 Aligned Residues 199 % Identity 24% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		F	A	D	V	A	G	C	D	E	A	K	E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	.	.	.	A	K	V	P	F	F	T	I	S	G	S	D	F	V	E	M	F	V	G
Query Conservation																																																												.	.	.
Alig confidence																				.	.	.																																						.	.	.
Template Conservation																				.	.	.
Template Sequence		H	S	R	V	I	G	Q	D	E	A	V	V	A	V	A	K	A	V	.	.	.	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D	M	S	E	Y	M	E	K	H	S	T
Template Known Secondary structure			T	T	S		S													.	.	.				T	T	T		S		T	T	S		S							S		T	T	S	S														S		T	T							G	G	G	G		S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.				.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	.	.	.	.	E	G	I	I	V	I	A	A	T	N	R	P	D	V	L
Query Conservation																																																															.	.	.	.
Alig confidence			.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation			.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	.	.	.	.	.	.	.	L	T	E	K	V	R	R	K	P	Y	S	V	V	L	L	D	A	I	E	K	A	H	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A	S	E
Template Known Secondary structure			.	.	.	.	.	.	.									S	S	S							G	G	G	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	B					B		T	T								S	S	S	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		584								.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.															.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		304	.	.	.								.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.											.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.		360	.
Predicted Secondary structure						.	.	.	.	.	.	.				.	.	.																																.	.	.	.	.	.	.	.	.	.												.								.
Query SS confidence						.	.	.	.	.	.	.				.	.	.																																.	.	.	.	.	.	.	.	.	.												.								.
Query Sequence		D	P	A	L	.	.	.	.	.	.	.	L	R	P	.	.	.	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	R	V	P	L	A	.	.	.	.	.	.	.	.	.	.	P	D	I	D	A	A	I	I	A	R	G	.	T	P	G	F	S	G	A	.	D	L
Query Conservation						.	.	.	.	.	.	.				.	.	.																																.	.	.	.	.	.	.	.	.	.												.								.
Alig confidence						.	.	.	.	.	.	.				.	.	.													.	.																		.	.	.	.	.	.	.	.	.	.												.								.
Template Conservation																															.	.
Template Sequence		K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	I	D	E	I	I	V	F	H	E	K	.	.	K	H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L
Template Known Secondary structure													S						T	T	S	S									.	.																				T	T	T															G	G	G			T	T	T	T	T	T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.			.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	L	V	N	E	A	A	L	F	A	A	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	A	I	Q	K	H	V	E	D	R	L	S	E
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions