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Job DescriptionP0AAI3
Confidence99.90%DateThu Jan 5 11:13:00 GMT 2012
Rank43Aligned Residues229
% Identity25%Templatec3pvsA_
PDB info PDB header:recombinationChain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  TFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVG
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Template Sequence  NLAQYIGQQHLLAAGKPLPRAIEAG. . . . . . . . . HLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTS. . . GVKEI
Template Known Secondary structure  STTT

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Query Sequence  ASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNR. . PDVLDPAL
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Template Sequence  REAIERARQNRNAGRRTILFVDEVHRF. . . . . . . . . . . . . . . . . . . . AFLPHIE. . . . DGTITFIGATTENPSFELNSAL
Template Known Secondary structure  TT

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Query Sequence  LRPGRFDRQVVVGLPDVRGREQILKVHMRRV. . . . . . . . PLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARG. . NK
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Template Sequence  LS. . RA. RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNG. DARRALNTLEMMADMAEVDDSGK
Template Known Secondary structure  T..T.





TTTSSTTSS


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   154. .. ..160.........170.........180.........190.........200...... ...210.........220.........
 
   378.380.........390.........400.........410...... ...420....
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Query Sequence  RVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEA. . . . . GHAIIGRL
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Template Sequence  RVLKPELLTEIA. . . . . . GERSARKGDRFYDLISALHKSVRGSAPDAALYWY
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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