Job Description P0AAI3 Confidence 99.96% Date Thu Jan 5 11:13:00 GMT 2012 Rank 27 Aligned Residues 229 % Identity 19% Template c3pfiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate Resolution 2.69 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	F	A	D	V	A	G	C	D	E	A	K	E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	K	V	P	F	F	T	I	S	G	S	D	F	V	E	M	F	V	G	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.																																												.	.	.	.
Template Conservation																												.	.	.	.	.	.	.																																												.	.	.	.
Template Sequence		S	N	F	D	G	Y	I	G	Q	E	S	I	K	K	N	L	N	V	F	I	A	A	A	K	K	R	.	.	.	.	.	.	.	N	E	C	L	D	H	I	L	F	S	G	P	A	G	L	G	K	T	T	L	A	N	I	I	S	Y	E	X	S	A	N	I	K	T	T	A	A	P	X	I	E	K	S	.	.	.	.
Template Known Secondary structure				S	T	T			S																		T	.	.	.	.	.	.	.	T										S	S	T	T	S	S												T	T								G	G	G			S	S	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.																																												.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P	D	V	L	D	P	A	L	L
Query Conservation
Alig confidence		.	.													.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation		.	.													.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		.	.	G	D	L	A	A	I	L	T	N	L	S	E	.	.	G	D	I	L	F	I	D	E	I	H	R	L	S	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	V	L	Y	P	A	X	E	.	.	.	D	Y	P	K	F	T	L	I	G	A	T	T	R	A	G	X	L	S	N	P	L	R
Template Known Secondary structure		.	.									T			T	.	.	T							S	G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	T											S		G	G	G	S
Template Predicted Secondary structure		.	.													.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
				92	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.															.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	R	V	P	L	A	.	P	D	I	D	A	A	I	I	A	R	G	T	P	G	F	S	G	A	D	L	A	N	L	V	N	E	A	A	L	F	A	A	R	G	N	K	R	V	V	S	M	V	E	F	E	K
Query Conservation																																			.
Alig confidence			.	.																															.															.
Template Conservation			.	.																																														.
Template Sequence		D	.	.	R	F	G	X	Q	F	R	L	E	F	Y	K	D	S	E	L	A	L	I	L	Q	K	A	A	L	K	L	N	K	T	C	E	E	K	A	A	L	E	I	A	K	R	S	R	S	.	T	P	R	I	A	L	R	L	L	K	R	V	R	D	F	A	D	V	N	D	E	E	I	I	T	E	K	R	A	N	E
Template Known Secondary structure		T	.	.	T		S																								T	T															T	T	T	.																			T	T		S
Template Predicted Secondary structure			.	.																																														.
Template SS confidence
		170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	K	I	M	M	G	A	E	R	R	S	M	V	M	T	E	A	Q	K	E	S	T	A	Y	H	E	A
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		A	L	N	S	L	.	.	.	.	G	V	N	E	L	G	F	D	A	X	D	L	R	Y	L	E	L	L	T	A
Template Known Secondary structure							.	.	.	.	T			T	T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		247	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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