Job Description P0AAI3 Confidence 98.53% Date Thu Jan 5 11:13:00 GMT 2012 Rank 113 Aligned Residues 161 % Identity 19% Template c3iytG_ PDB info PDB header:apoptosis Chain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex Resolution 9.50 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		K	E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	.	.	.	.	.	.	.	G	E	A	K	V	P	F	F	T	I	S	G	S	D	F	V	E	M	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.																										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		K	K	L	V	N	A	I	Q	Q	K	L	S	K	L	.	.	.	.	.	.	.	K	G	E	P	G	W	V	T	I	H	G	M	A	G	C	G	K	S	V	L	A	A	E	A	V	R	D	H	S	L	L	E	G	C	F	P	G	G	V	H	W	V	S	V	G	K	Q	D	K	S	G	L	L	M	K	L	Q	N	L
Template Known Secondary structure													T	T	S	.	.	.	.	.	.	.	T	T	S										T	T	S	S																				T	T									S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
														225	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	.	.	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	R	L	D	Q	D	E	S	F	S	Q	R	L	P	L	N	I	E	E	A	K	D	R	L	R	I	L	M	L	R	K	H	P	R	S	L	L	I	L	D	D	V	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	V	L	K	A	F	D	S	Q	C	Q
Template Known Secondary structure							S	S			S		S	S				S															T		T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																								.	.	250	.	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	V	I	A	A	T	N	R	P	D	V	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	R	V	P	L	A	P	D	I	D	A	A	I	I	A	R	G	T	P	G	F
Query Conservation
Alig confidence					.	.	.															.	.
Template Conservation					.	.	.															.	.
Template Sequence		I	L	L	.	.	.	T	T	R	D	K	S	V	T	D	S	V	M	G	P	.	.	K	Y	V	V	P	V	E	S	S	L	G	K	E	K	G	L	E	I	L	S	L	F	V	N	M	K	K	A	D	L	P	E	Q	A	H	S	I	I	K	E	C	K	G	S
Template Known Secondary structure					.	.	.			S		G	G	G	G	T	T			S		.	.																								T			S	T	T			T										T	T
Template Predicted Secondary structure					.	.	.															.	.
Template SS confidence
		260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions