Job Description P0AAI3 Confidence 98.26% Date Thu Jan 5 11:13:00 GMT 2012 Rank 123 Aligned Residues 114 % Identity 16% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220																			.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	R	F	Q	K	L	G	G	K	I	P	K	G	.	.	.	.	.	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	.	.	K	V	P	F	F	T	I	S	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	E	M	F
Query Conservation																.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	M	M	N	I	A	L	S	G	E	I	T	G	G	M	Q	S	G	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	G	V	D	P	E	R	V	I	H	T	P	V	Q
Template Known Secondary structure										S	S	T	T					S									S	S	S	S																	T	T								S	S											T	T			G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		226	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	G	V	G	.	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T
Query Conservation						.
Alig confidence						.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	.	.	.	.	.	.	.	.	.	.	R	A	K	T	M	K	S	L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I	A	I	N
Template Known Secondary structure		B														T			T	T										S	T	T		B				.	.	.	.	.	.	.	.	.	.																			T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions