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Job DescriptionP0AAI3
Confidence100.00%DateThu Jan 5 11:13:00 GMT 2012
Rank15Aligned Residues236
% Identity34%Templatec3d8bB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fidgetin-like protein 1; PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160......... 170.........180.........190.........200.........210.........220
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Query Sequence  LTEDQIKTTFADVAGCDEAKEEVAELVE. YLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSD
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Template Sequence  IMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR. GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISAS.
Template Known Secondary structure  TB

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GGGS
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T
TTTS
TTS.S

SSSTTSST
GG.
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   391........400.........410.........420.........430. ........440.........450.........460........
 
   221........230.........240.........250.........260.........270.........280.........290.........300
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Query Sequence  FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRP
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Template Sequence  . . . . SLTEGEKMVRALFAVARCQQPAVIFIDEIDSLLSSR. . . . . . . . . . . . RIKTEFLVQLD. . GAEDRILVVGATNRP
Template Known Secondary structure  ....GG

T
STT

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   469470.........480.........490.........500.... .....510..... ....520.........530
 
   301........310.........320.........330. ........340.........350.........360.........370.........
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Query Sequence  DVLDPALLRPGRFDRQVVVGLPDVRGREQIL. KVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRV
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Template Sequence  QEIDEAARR. . RLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTA
Template Known Secondary structure  GG

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   549550....... ..560.........570.........580.........590.........600.........610.........620......
 
   380.........390.........
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Query Sequence  . . . . . . . . . . VSMVEFEKAKDKIMMGAERR
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Template Sequence  ATITPDQVRPIAYIDFENAFRTVRPSVSPK
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GGGS

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GGG



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   629630.........640.........650........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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