Job Description P0AAI3 Confidence 99.88% Date Thu Jan 5 11:13:00 GMT 2012 Rank 48 Aligned Residues 209 % Identity 16% Template c3bosA_ PDB info PDB header:hydrolase regulator,dna binding protein Chain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution Resolution 1.75 Å

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		146	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure										.																																																									.	.	.
Query SS confidence										.																																																									.	.	.
Query Sequence		Q	I	K	T	T	F	A	D	.	V	A	G	C	D	E	A	K	E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	K	V	P	F	F	T	I	S	G	S	D	F
Query Conservation										.																																																									.	.	.
Alig confidence										.																	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	D	E	T	F	T	S	Y	Y	P	G	N	D	E	L	I	G	A	L	K	S	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	N	E	L	E	R	R	S	F	Y	I	P	L	G	I	H
Template Known Secondary structure			T	T		S	T	T	T	S																	.	.	.	.	.	.	.	.	.	.	.	.	T		S		S							S	T	T	S	S															T	T								G	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P	.
Query Conservation																																																																																	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.																				.	.	.															.
Template Conservation							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		A	S	I	S	T	.	.	.	.	.	.	.	.	.	.	A	L	L	E	G	L	E	Q	F	D	L	I	C	I	D	D	V	D	A	V	.	.	.	.	.	.	.	.	A	G	H	P	L	W	E	E	A	I	F	D	L	Y	N	R	V	A	E	.	.	.	Q	K	R	G	S	L	I	V	S	A	S	A	S	P	X
Template Known Secondary structure		G	G	S		G	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	G	G	G	S	S						T	G	G	G	G	.	.	.	.	.	.	.	.	T	T																		.	.	.			S								S	S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		91	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
				301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																										.
Query SS confidence		.	.																																										.
Query Sequence		.	.	D	V	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	R	V	P	L	A	.	P	D	I	D	A	A	I	I	A	R	G	T	P	G	F	S	G	A	D	L	A	N	L	V	N	E	A	A	L	F	A	A	R	G	N	K
Query Conservation		.	.																																										.
Alig confidence		.	.																																										.															.
Template Conservation																																																												.
Template Sequence		E	A	G	F	V	L	P	D	L	V	S	R	X	H	W	G	L	T	Y	Q	L	Q	P	X	X	D	D	E	K	L	A	A	L	Q	R	R	A	A	X	R	G	L	Q	L	P	E	D	V	G	R	F	L	L	N	R	X	A	R	.	D	L	R	T	L	F	D	V	L	D	R	L	D	K	A	S	X	V	H	Q	R
Template Known Secondary structure		T	T	T													S										G	G	G												T	T															T	T	T	.																				T
Template Predicted Secondary structure																																																												.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	S	M	V	E	F	E	K	A	K
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		K	.	L	T	I	P	F	V	K	E	X	L
Template Known Secondary structure			.
Template Predicted Secondary structure			.
Template SS confidence
		229		230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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