Job Description P0AAI3 Confidence 98.34% Date Thu Jan 5 11:13:00 GMT 2012 Rank 117 Aligned Residues 148 % Identity 18% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		158	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.
Predicted Secondary structure														.																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	A	K	E	E	V	A	E	L	V	E	.	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	K	V	P	F	F	T	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																									.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	S	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A
Template Known Secondary structure																						S					S	S	S										T	T	S																T	T											S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
					218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.
Predicted Secondary structure		.	.	.																																																																										.	.	.
Query SS confidence		.	.	.																																																																										.	.	.
Query Sequence		.	.	.	G	S	D	F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	.	.	.	I
Query Conservation		.	.	.																																																																										.	.	.
Alig confidence		.	.	.																																					.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	.	.	.	.	.	.	.	.	.	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L
Template Known Secondary structure					T																									T	T		S								.	.	.	.	.	.	.	.	.			S	S																		T	T	S	T	T			S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	A	A	T	N	R	P	D	V	L	D	P	A	L	L	R	P	G	R	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G
Template Known Secondary structure						G	G	G	G	G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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