Job Description P0AAI3 Confidence 100.00% Date Thu Jan 5 11:13:00 GMT 2012 Rank 14 Aligned Residues 248 % Identity 38% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	T	E	D	Q	I	K	T	T	F	A	D	V	A	G	C	D	E	A	K	E	E	V	A	E	L	V	E	.	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	K	V	P	F	F	T	I	S	G	S	D
Query Conservation																														.
Alig confidence																														.															.
Template Conservation																																													.
Template Sequence		I	V	E	G	G	A	K	V	E	W	T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	.	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	S	A	T	F	L	N	I	S	A	A	S
Template Known Secondary structure		T	B			S	S				G	G	G	S														T							G	G	G	S		G	G	G			.		S						S	S	S	S	S													T	T								S	T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.													.	.	.
Template Sequence		L	T	S	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	.	.	.	.	.	.	.	.	R	R	L	K	T	E	F	L	V	E	F	D	.	.	.	G	L	P	R	I	V	V	L	A	A	T	N	R	P
Template Known Secondary structure		T	S	S	S	S		S																T		S							T	G	G	G	T	S	B					S	.	.	.	.	.	.	.	.													.	.	.												S		G
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.									.	.	.	.	.	600	.	.	.	.	.	.				.	.	.	610	.	.	.	.	.	.	.	.	.	620
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																											.																																			.	.	.	.
Query SS confidence																																											.																																			.	.	.	.
Query Sequence		D	V	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	R	V	P	L	A	.	P	D	I	D	A	A	I	I	A	R	G	T	P	G	F	S	G	A	D	L	A	N	L	V	N	E	A	A	L	F	A	A	R	G	.	.	.	.
Query Conservation																																											.																																			.	.	.	.
Alig confidence											.	.																															.																																			.	.	.	.
Template Conservation											.	.
Template Sequence		Q	E	L	D	E	A	A	L	R	.	.	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	N	R	L	L	Q	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y	S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S
Template Known Secondary structure		G	G	B							.	.																									G	G	G	S			S												T	T	T														T	T					T
Template Predicted Secondary structure											.	.
Template SS confidence
		632	.	.	.	.	.	.	.	640			.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	R	V	V	S	M	V	E	F	E	K	A	K	D	K	I	M	M	G	A	E	R	R	S	M	V	M	T	E	A	Q	K	E	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		A	M	R	A	I	T	E	Q	D	F	H	S	S	L	.	.	.	.	.	.	.	K	R	I	R	R	S	V	A	P	Q	S	L	N	S
Template Known Secondary structure															T	.	.	.	.	.	.	.	T	S				S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		718	.	720	.	.	.	.	.	.	.	.	.	730	.								.	.	.	.	.	.	.	.	740	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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