Job Description P0AAI3 Confidence 93.48% Date Thu Jan 5 11:13:00 GMT 2012 Rank 463 Aligned Residues 99 % Identity 17% Template c2wv9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus Resolution 2.75 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																										.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																	.										.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.										.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	.	L	A	K	A	I	A	G	E	A	.	.	.	K	V	P	F	F	T	I	S	G	S	D	F	V	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	G	V	G	A	S	R	V	R	D	M
Query Conservation																	.										.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.										.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	T	V	L	D	L	H	P	G	A	G	K	T	R	R	I	L	P	Q	I	I	K	D	A	I	Q	K	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	L	T	P	R	E	H	S	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L
Template Known Secondary structure										T	T	T	T	T	T	T	T												T	T								S	S											T	T	T	S												S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Q	A	K	K	A	A	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		M	S	P	L	R	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	.	.	.	.	.	.	.	.	.	.	.	D	P	A	S	I	A	A	R	G	Y	I	A	T	R	V	E	.	.	A	G	E	A	A	A	I	F	M	T	A	T
Template Known Secondary structure			S	S	S						S						S	T	T			.	.	.	.	.	.	.	.	.	.	.																	.	.	T	T	S								S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions