Job Description P0AAI3 Confidence 99.85% Date Thu Jan 5 11:13:00 GMT 2012 Rank 61 Aligned Residues 150 % Identity 23% Template c2p65A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pf08_0063; PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	A	D	V	A	G	C	D	E	A	K	E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	.	.	.	.	.	.	.	.	.	.	A	K	V	P	F	F	T	I	S	G	S
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	D	P	V	I	G	R	D	T	E	I	R	R	A	I	Q	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	R	R	T	K	N	N	P	I	L	L	G	D	P	G	V	G	K	T	A	I	V	E	G	L	A	I	K	I	V	Q	G	D	V	P	D	S	L	K	G	R	K	L	V	S	L	D	L	S
Template Known Secondary structure			S					S													T	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S							S		G	G	G															T	T		S		T	T	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure				.	.																								.
Query SS confidence				.	.																								.
Query Sequence		D	F	.	.	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	.	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A
Query Conservation				.	.																								.
Alig confidence				.	.																								.																									.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		S	L	I	A	G	A	K	Y	R	G	D	F	E	E	R	L	K	S	I	L	K	E	V	Q	D	A	E	G	Q	V	V	M	F	I	D	E	I	H	T	V	V	G	A	G	A	V	A	E	G	A	L	D	.	.	.	.	.	.	.	.	.	A	G	N	I	L	K	P	M	L	A	R	G	E	L	R	C	I	G	A
Template Known Secondary structure									S																		T	T	T	S						T	T	G	G	G	G	S	S	S	S	S	S		T	T	S			.	.	.	.	.	.	.	.	.	T										T	T		S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		297	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		T	N	R	P	D	.	.	.	.	.	V	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.									.	.				.
Template Conservation																				.	.				.
Template Sequence		T	T	V	S	E	Y	R	Q	F	I	E	K	D	K	A	L	E	R	.	.	R	F	Q	.	Q	I	L	V	E	Q	P	S
Template Known Secondary structure											T	T	T							.	.				.						S
Template Predicted Secondary structure																				.	.				.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.		180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions