Job Description P0AAI3 Confidence 99.25% Date Thu Jan 5 11:13:00 GMT 2012 Rank 99 Aligned Residues 120 % Identity 17% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	K	V	P	F	F	T	I	S	G	S	D	F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	C	I	I
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	A	E	L	V	Y	V	L	R	H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	P	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	F	E	A	E	Y	L
Template Known Secondary structure			T													S						S	S	S	T	T	T	T													T	T	T								T	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G		S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																.	80	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P	D	V	.	.	.	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P
Query Conservation																																																								.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.								.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Sequence		A	V	D	Q	V	E	K	L	G	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	L	L	F	S	I	F	N	R	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	Q	L	V	I	R	E	D	L	R	T	.	.	R	M	A	Y	C	L	V	Y	E	V	K
Template Known Secondary structure					S	T	T				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.																T									S	S		T	T	T	S	S								.	.		G	G	G	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.															.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions