Job Description P0AAI3 Confidence 96.88% Date Thu Jan 5 11:13:00 GMT 2012 Rank 289 Aligned Residues 122 % Identity 17% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																																				.	.	.	.
Query SS confidence																								.	.	.	.	.	.																																				.	.	.	.
Query Sequence		V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	.	.	.	.	.	.	K	V	P	F	F	T	I	S	G	S	D	F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	.	.	.	.	P	C	I	I	F	I	D	E	I	D	A	V	G
Query Conservation																								.	.	.	.	.	.																																				.	.	.	.
Alig confidence																								.	.	.	.	.	.												.	.	.	.	.																				.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	.	.	.	.	.	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	T	R	K	Y	V	I	V	H	D	C	E	R	X	T
Template Known Secondary structure							S	S	S	S															T	S				T	T	T							S	S	.	.	.	.	.	S		B													T	S			S	S	S	S	S						T	T	G	G	G	B
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I	I	V	I	A	A	T	N	R	P	D	V	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																									.	.			.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																									.	.			.
Template Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	A	N	A	F	L	K	A	L	E	.	.	E	P	P	E	Y	A	V	I	V	L	N	T	R	R	W	H	Y	L	L	P	T	I	K	S	.	.	R	V	.	F	R	V	V	V	N	V	P	K	E	F	R	D	L	V	K	E	K	I
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.						T						.	.	S			T	T								S		G	G	G	S						T	.	.	T	S	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																									.	.			.
Template SS confidence
		103															.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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