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Job DescriptionP0AAI3
Confidence99.08%DateThu Jan 5 11:13:00 GMT 2012
Rank103Aligned Residues195
% Identity22%Templatec2fnaA_
PDB info PDB header:atp-binding proteinChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of an archaeal aaa+ atpase (sso1545) from sulfolobus2 solfataricus p2 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE
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Template Sequence  DTSPKDNRKDFFDREKEIEKLKGL. . . . . . . . . . . . . . . . RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEE
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SGGGS


T................
SSSTTSST

GGGGTT
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   4.....10.........20....... ..30.........40.........50.........60.......
 
   224.....230.........240. ........250.........260
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Query Sequence  MFVGVGASRVRDMFEQAK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KAAPCIIFIDEIDAVGRQR
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Template Sequence  RNYISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIXGNEIKFNRLSFANLLESFEQASKDNVIIVLDEAQELVKLR
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TTTTTSTT
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T
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TGGGGGG
T
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   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   261........270.........280.........290.........300... ......310.........320.........330...
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Query Sequence  GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVL. . . . . . . DPALLRPGRFDRQVVVGLPDVRGREQILKV
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Template Sequence  GVN. . . . . . . . . . LLPALAYAYD. . . NLKRIKFIXSGSEXGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRR
Template Known Secondary structure  T

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TTSSTTTT
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   153.. ....160..... ....170.........180.........190.........200.........210.........
 
   334.....340.........350.........360.........
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Query Sequence  HMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA
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Template Sequence  GFQEADIDFK. DYEVVYEKIGG. IPGWLTYFGFIYL
Template Known Secondary structure  T



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   220......... 230.........240 .........250...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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