 |
Job Description | P0AAI3 | Confidence | 92.88% | Date | Thu Jan 5 11:13:00 GMT 2012 |
Rank | 499 | Aligned Residues | 92 |
% Identity | 18% | Template | c1t9hA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:probable gtpase engc; |
PDBTitle: the crystal structure of yloq, a circularly permuted gtpase.
|
Resolution | 1.60 Å |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | A | G | C | D | E | A | K | E | E | V | A | E | L | V | E | Y | L | R | E | P | . |
. |
. |
. |
. |
. |
. |
S | R | F | Q | K | L | G | G | K | . |
. |
. |
. |
. |
. |
I | P | K | G | V | L | M | V | G | P | P | G | T | G | K | T | L | L | A | K | A | I | A | G | E | A | K | V | P | F | F | T | I | S | G | S |
Query Conservation |   |
|
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . |   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
D | L | I | E | D | Q | D | T | E | D | T | I | Q | A | Y | A | E | D | Y | R | N | I | G | Y | D | V | Y | L | T | S | S | K | D | Q | D | S | L | A | D | I | I | P | H | F | Q | D | K | T | T | V | F | A | G | Q | S | G | V | G | K | S | S | L | L | N | A | I | S | P | T | R | H | V | E | L | I | H | T | S | G | G |
Template Known Secondary structure |   |
G | G |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
|  |  |  |  | T | T |
| T | T | T | G | G | G | G | T | T | S |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
  |   |
220 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | F | V | E | M | . |
. |
. |
. |
. |
. |
. |
F | V | G | V | G | A | S | R | V | R | D | M | F | E | Q | A | K | K | A | A |
Query Conservation |   |
  |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |
Template Sequence |   |
L | V | A | D | T | P | G | F | S | S | L | E | F | T | D | I | E | E | E | E | L | G | Y | T | F | P | D | I | R | E | K | S |
Template Known Secondary structure |   |
 |  |  | S | S |
| S |
| S | S |
|
|
| T | T |
|
|  |  |  |  | G | G | G | S |  |  |  |  |  |  | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|