Job Description P0AAI3 Confidence 97.73% Date Thu Jan 5 11:13:00 GMT 2012 Rank 178 Aligned Residues 123 % Identity 19% Template c1t4gA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp Resolution 2.00 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																				.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Query Sequence		P	S	R	F	Q	K	L	G	G	K	I	P	K	G	.	.	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	K	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	T	I	S	G	S	D	F	V	E	.	.	.	.	.	.	.	.	.
Query Conservation																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Alig confidence																.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	L	D	S	V	L	G	G	G	L	E	S	Q	S	V	T	E	F	A	G	V	F	G	S	G	K	T	Q	I	M	H	Q	S	C	V	N	L	Q	N	P	E	F	L	F	Y	D	E	E	A	V	S	K	G	E	V	A	Q	P	K	A	V	Y	I	D	T	E	G	T	F	R	P	E	R	I	M	Q	M	A	E
Template Known Secondary structure								T	T	T	S			B	T	S							S	T	T	S	S												T	T		G	G	G					T	T	T	S		G	G	G	G	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																				224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	P	.	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																			.
Template Conservation																																																													.
Template Sequence		H	A	G	I	D	G	Q	T	V	L	D	N	T	F	V	A	R	A	Y	N	S	D	M	Q	M	L	F	A	E	K	I	E	D	L	I	Q	E	G	N	N	I	K	L	V	V	I	D	S	L	T	S	T	F	R	N	E	Y	T	G	.	R	G	K	L	A	E	R	Q	Q	K	L	G	R	H	M	A	T	L	N	K
Template Known Secondary structure				T	S								T							S	S										T							T	T											S	S							S		S	.	T	T	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	G	N	E	G	I	I	V	I	A	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	L	F	N	C	V	V	L	V	T	N
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions