Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI3
Confidence99.98%DateThu Jan 5 11:13:00 GMT 2012
Rank25Aligned Residues206
% Identity22%Templatec1nsfA_
PDB info PDB header:protein transportChain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.........210.........220...... ...230..
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Query Sequence  VAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFV. GVGASR
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Template Sequence  IIKWGDPVTRVLDDGELL. . VQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQA
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   507..510.........520.... .....530.........540.........550.........560.........570.........580....
 
   233......240.........250.........260.........270.........280........ .290.........300.........310.
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Query Sequence  VRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN. EGIIVIAATNRPDVLDPALLRPG
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Template Sequence  MKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNL. . . . VLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML. N
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   585....590.........600.........610.........620. ........630.........640.........650........ .
 
   312.......320.........330.........340.........350........ .360.........
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Query Sequence  RFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG. . . . ADLANLVNEAA
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Template Sequence  AFSTTIHVPNIATGEQLLEALELLGNF. . . KDKERTTIAQQVKGKKVWIGIKKLLMLIEMSL
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   660.........670.........680...... ...690.........700.........710........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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