Job Description P0AAI3 Confidence 99.58% Date Thu Jan 5 11:13:00 GMT 2012 Rank 90 Aligned Residues 162 % Identity 19% Template c1jr3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii Resolution 2.70 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																									.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	E	E	V	A	E	L	V	E	Y	L	R	E	P	S	R	F	Q	K	L	G	G	K	I	P	K	G	V	L	M	V	G	P	P	G	T	G	K	T	L	L	A	K	A	I	A	G	E	A	K	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	T
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	.	.	.	.	.	.	.	.	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T
Template Known Secondary structure											T	T	T	T	T	.	.	.	.	.	.	.	.	S				S								T	T	S	S													T		S	S			S	S	S			S		S								T	S			S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		I	S	G	S	D	F	V	E	M	F	V	G	V	G	A	S	R	V	R	D	M	F	E	Q	A	K	K	A	A	.	.	.	.	P	C	I	I	F	I	D	E	I	D	A	V	G	R	Q	R	G	A	G	L	G	G	G	H	D	E	R	E	Q	T	L	N	Q	M	L	V	E	M	D	G	F	E	G	N	E	G	I
Query Conservation																															.	.	.	.
Alig confidence						.	.	.																							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation						.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		L	A	P	E	.	.	.	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	A	N	A	L	L	K	T	L	E	.	.	E	P	P	A	E	T
Template Known Secondary structure						.	.	.	T	T	S	S	S	B													S	S			T	T	S	S							S		G	G	G	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	S			T	T
Template Predicted Secondary structure						.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		79	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.															.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	A	A	T	N	R	P	D	V	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	V	V	V	G	L	P	D	V	R	G	R	E	Q	I	L	K	V	H	M	R	R	V	P	L	A	P	D	I	D	A	A	I	I	A	R	G	T	P	G
Query Conservation
Alig confidence																				.	.			.																								.	.	.	.
Template Conservation																				.	.			.																								.	.	.	.
Template Sequence		W	F	F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	S	.	.	R	C	.	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	E	V	T	M	.	.	.	.	S	Q	D	A	L	L	A	A	L	R	L	S	A	G
Template Known Secondary structure								S		S	T	T	S		T	T	T	T	T	.	.	T	S	.																					S			.	.	.	.											T	T	T	T
Template Predicted Secondary structure																				.	.			.																								.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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