 |
Job Description | P77743 | Confidence | 89.09% | Date | Thu Jan 5 12:32:24 GMT 2012 |
Rank | 340 | Aligned Residues | 41 |
% Identity | 20% | Template | d1vz0a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| KorB DNA-binding domain-like
| KorB DNA-binding domain-like
|
Resolution | 2.3 |
|
  |   |
487 | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | T | P | A | P | R | L | L | T | P | Q | Q | A | L | E | K | F | N | G | D | K | T | A | A | A | N | Y | L | G | I | S | R | T | T | F | W | R | R | L | K |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|
|   |   |
|
|
|
|
|   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |
Template Sequence |   |
E | D | L | S | P | V | E | E | A | R | G | Y | Q | A | L | L | E | M | G | L | T | Q | E | E | V | A | R | R | V | G | K | A | R | S | T | V | A | N | A | L | R |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|