Return to main results Retrieve Phyre Job Id

Job DescriptionP77743
Confidence99.76%DateThu Jan 5 12:32:24 GMT 2012
Rank20Aligned Residues205
% Identity20%Templated1l8qa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   209210....... ..220.. .......230.........240.........250.........260.........270.........280.....
Predicted Secondary structure  .


..
























Query SS confidence 








.




. .






























































Query Sequence  LRTRYVLGD. MLGQS. . PQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGA
Query Conservation        
  .


 
..             
    



 

 



   
  

  
         
   


 


  
Alig confidence 








.




..








































........













Template Conservation 
    

   


  
                    


 







 

 


   ........              
Template Sequence  LNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEA. . . . . . . . KKRGYRVIYSSADD
Template Known Secondary structure 

TT

SSS



TTTTTTTS
SS
SSSSS........TT

Template Predicted Secondary structure 




















........





Template SS confidence 















































































   7980.........90.........100.........110.........120.........130...... ...140.........150
 
   286...290.........300.........310.........320.........330.... .....340.........350.........360...
Predicted Secondary structure 



























..







Query SS confidence 
















































. .




























Query Sequence  IAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLP. . LQTRLLRVLEEKEVTRVGGHQPVPVDVRV
Query Conservation      
 





   





      
    
  







  
   .. 
  

  
        
        


Alig confidence 











...........

























..










..........







Template Conservation              ...........             

 



                   ..........        
Template Sequence  FAQAXVEHLKKG. . . . . . . . . . . TINEFRNXYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT. . . . . . . . . . LYLLEKQI
Template Known Secondary structure  T...........
T
S
GGGGTT
..........TT
Template Predicted Secondary structure  ...........








..........



Template SS confidence 















































































   151........160.. .......170.........180.........190.........200. ........
 
   364.....370.........380.........390.........400.........410.........420.........430.........440...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  ISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYD
Query Conservation 
 

   
      
 
  

  

    
 






 


  
    
                     

  
  
 
Alig confidence 






















..
















.......










.......











.
Template Conservation 
                   
  ..                
.......
          .......
    
  

  .
Template Sequence  ILASDRHPQKLDGVSDRLVSRFE. . GGILVEIELDNKTRFKI. . . . . . . IKEKLKEFNLE. . . . . . . LRKEVIDYLLEN.
Template Known Secondary structure  SS
GGG
TTS
..TS



.......TT

.......

.
Template Predicted Secondary structure 


..





.......


.......


.
Template SS confidence 















































































   210.........220.........230.. .......240......... 250.........260 .........270..
 
   444.....450.........460
Predicted Secondary structure 


Query SS confidence 
















Query Sequence  WPGNIRELRNMMERLAL
Query Conservation 







  

 
   
Alig confidence  .















Template Conservation  .  
 
 
   
  
  
Template Sequence  . TKNVREIEGKIKLIKL
Template Known Secondary structure  .
SS
Template Predicted Secondary structure  .



Template SS confidence 
















   273......280........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions