|   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
R | Y | V | L | G | D | M | L | G | Q | S | P | Q | M | E | Q | V | R | Q | T | I | L | L | Y | A | R | S | S | A | A | V | L | I | E | G | E | T | G | T | G | K | E | L | A | A | Q | A | I | H | R | E | Y | F | A | R | H | D | A | R | Q | G | K | K | S | H | P | F | V | A | V | N | C | G | A | I | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |
|
|
|
|
|   |   |
|   |   |
| . | . |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | F | P | F | S | A | I | V | G | Q | E | D | M | K | L | A | L | . |
. |
L | L | T | A | V | D | P | G | I | G | G | V | L | V | F | G | D | R | G | T | G | K | S | T | A | V | R | A | L | A | A | L | L | P | E | I | E | A | V | . |
. |
. |
. |
E | G | C | P | V | S | S | P | N | V | E | M | I | P | D | W | A | T |
Template Known Secondary structure |   |
|
|
| G | G | G | S |
| S |
|  |  |  |  |  |  |  | . | . |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |
|
| G | G | G |
| T | T |  |  |  |  |  |  |  |  |  | S |
|
|  |  |  |  | . | . | . | . | T | T |
| T | T |
|
| S | S | G | G | G | S |
| T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
287 | . | . | 290 | . | . | . | . | . | . | . | . | |
|
|
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | S | L | L | E | A | E | L | F | G | Y | . |
. |
. |
E | E | G | A | F | T | G | S | R | R | G | G | R | A | G | L | F | E | I | A | H | G | G | T | L | F | L | D | E | I | G | E | M | P | L | P | L | Q | T | R | L | L | R | V | L | E | E | K | E |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|
|
|   | . | . | . |   |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |
Template Sequence |   |
V | L | S | T | N | V | I | R | K | P | T | P | V | V | D | L | P | L | G | V | S | E | D | R | V | V | G | A | L | D | I | E | R | A | I | S | K | G | E | K | A | F | . |
E | P | G | L | L | A | R | A | N | R | G | Y | L | Y | I | D | E | C | N | L | L | E | D | H | I | V | D | L | L | L | D | V | A | Q | S | G | E |
Template Known Secondary structure |   |
| S |
|
|
|  |  |  |  |
|
|
|  |  |  |  |
| T | T |
|
|  |  |  |  |  |
|  |  |
|  |  |  |  |  |  |  |
| G | G | G |  | . |  |
|
|  |  |  |  |  | T | T |  |  |  |  |  | T | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
348 | . | 350 | |
|
. | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | R | . |
. |
V | G | G | H | Q | P | V | P | V | D | V | R | V | I | S | A | T | H | C | N | L | E | E | D | M | Q | Q | G | R | F | R | R | D | L | F | Y | R | L | S | I | L | R | L | Q | L | P | P |
Query Conservation |   |
  |   |   | . | . |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|
Template Sequence |   |
N | V | V | E | R | D | G | L | S | I | R | H | P | A | R | F | V | L | V | G | S | G | N | P | . |
. |
. |
. |
. |
. |
E | E | G | D | L | R | P | Q | L | L | D | R | F | G | L | S | V | E | V | L | S | P |
Template Known Secondary structure |   |
 |  |  |
|
| T | T |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
| S | . | . | . | . | . | . |
| S |
|
|
|
|  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
  |