Return to main results Retrieve Phyre Job Id

Job DescriptionP77743
Confidence99.06%DateThu Jan 5 12:32:24 GMT 2012
Rank65Aligned Residues77
% Identity18%Templated1etob_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like FIS-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   445....450.........460.........470.........480.........490.........500.........510.........520....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  PGNIRELRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWR
Query Conservation 






  

 
         
                     
   
   
   
    

 
 

  




 

 
Alig confidence 




































......




































Template Conservation     
      
  

   
                  ...... 
   

  
  

    

   

  


 
 

  
Template Sequence  VSTVQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYEL. . . . . . VLAEVEQPLLDMVMQYTLGNQTRAALMMGINRGTLRK
Template Known Secondary structure 


TT


S
......TTT
T

Template Predicted Secondary structure 




......





Template SS confidence 















































































   13......20.........30.........40......... 50.........60.........70.........80......
 
   525..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  RLK
Query Conservation 


Alig confidence 


Template Conservation 


Template Sequence  KLK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   91..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions