Return to main results Retrieve Phyre Job Id

Job DescriptionP77743
Confidence99.44%DateThu Jan 5 12:32:24 GMT 2012
Rank37Aligned Residues195
% Identity16%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230..... ....240.........250.........260.........270.........280.......
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Query Sequence  GDMLGQSPQMEQVRQTILLY. . . . . . . . ARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIA
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Template Sequence  NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES. . . . . . . . . . . NFPFIKICSPDKM
Template Known Secondary structure  T




S
SS
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STTSS...........T
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GGG
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   513......520.........530.........540.........550.........560........ .570.........580.
 
   288.290.........300.........310.........320.........330. ........340.........350.......
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Query Sequence  ESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEM. . . . . . . . . . PLPLQTRLLRVLEEKEVTRVGGHQPV
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Template Sequence  IGFSETAKCQAMKKIFDDAYKS. . . . . . . . . QLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAP. . . . . . . . PQ
Template Known Secondary structure  TT

TS.........S

TT
BTTTTB

TT


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   582.......590.........600... ......610.........620.........630.........640.. ..
 
   358.360.........370.........380.........390.........400.........410.........420.........430.......
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Query Sequence  PVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASET
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Template Sequence  GRKLLIIGTTSRKD. . . . . . . VLQEMEMLNAFSTTIHVPNIATGEQ. . . . . . . . . LLEALELLGNF. . . . KDKERTTIAQ
Template Known Secondary structure  T
S
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TTTSS


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   645....650........ .660.........670.........680... ......690.... .....700....
 
   438.440.........450........
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Query Sequence  VLLHYDWPGNIRELRNMMERL
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Template Sequence  QVKGKKVWIGIKKLLMLIEMS
Template Known Secondary structure  TTS
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   705....710.........720.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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