Job Description P77743 Confidence 98.03% Date Thu Jan 5 12:32:24 GMT 2012 Rank 103 Aligned Residues 140 % Identity 8% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.
Predicted Secondary structure																						.	.																																																				.
Query SS confidence																						.	.																																																				.
Query Sequence		G	D	M	L	G	Q	S	P	Q	M	E	Q	V	R	Q	T	I	L	L	Y	.	.	A	R	S	S	A	A	V	L	I	E	G	E	T	G	T	G	K	E	L	A	A	Q	A	I	H	R	E	Y	F	A	R	H	D	A	R	Q	G	K	K	S	H	P	F	V	A	V	N	C	G	A	I	.	A	E	S	L	L	E
Query Conservation																						.	.																																																				.
Alig confidence																						.	.																																		.	.	.																.
Template Conservation																																																									.	.	.
Template Sequence		E	L	L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	.	.	.	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y
Template Known Secondary structure																								T	T												S																	T	T	T	.	.	.	T	T	S	S										T	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.				.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.											.
Query SS confidence																															.	.	.	.	.											.
Query Sequence		A	E	L	F	G	Y	E	E	G	A	F	T	G	S	R	R	G	G	R	A	G	L	F	E	I	A	H	G	G	.	.	.	.	.	T	L	F	L	D	E	I	G	E	M	.	P	L	P	L	Q	T	R	L	L	R	V	L	E	E	K	E	V	T	R	V	G	G	H	Q	P	V	P	V	D	V	R	V	I	S	A
Query Conservation																															.	.	.	.	.											.
Alig confidence																															.	.	.	.	.											.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	.	.	.	.	.	.	.	.	.	.	.	K	N	S	K	L	S	I	I	C	V
Template Known Secondary structure									S																		S		G	G	G	S											S	S	S			T													.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.												.	.	.	.	.	690	.	.	.	.
		367	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	H
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		697	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions