Job Description P77743 Confidence 91.41% Date Thu Jan 5 12:32:24 GMT 2012 Rank 247 Aligned Residues 174 % Identity 18% Template c3outC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from francisella tularensis2 subsp. tularensis schu s4 in complex with d-glutamate. Resolution 1.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.												.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		D	D	K	P	V	I	W	T	V	S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	F	E	.	.	.	.	.	.	.	.	.	.	.	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		D	N	R	P	I	G	V	F	D	S	G	I	G	G	L	T	I	V	K	N	L	X	S	I	L	P	N	E	D	I	I	Y	F	G	D	I	A	R	I	P	Y	G	T	K	S	R	A	T	I	Q	K	F	A	A	Q	T	A	K	F	L	I	D	Q	E	V	K	A	I	I	I	A	C	N	T	I	S	A	I	A	K
Template Known Secondary structure		T	T	S							S	S	S	T	T												T	T									T	T	T				T	T	S																			T	T		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
			74	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.							.																																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.							.																																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Y	L	K	S	R	L	.	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	A	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	.	.	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.							.																																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.							.								.	.	.	.	.	.	.																										.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		D	I	V	Q	E	I	A	K	A	I	P	V	I	D	V	.	.	.	.	.	.	.	I	T	A	G	V	S	L	V	D	N	L	N	T	V	G	V	I	A	T	P	A	T	I	N	S	N	A	Y	A	L	Q	I	H	K	K	N	P	N	I	E	V	Y	S	N	P	C	G	L	F	V	S	X	I	E	E	G	F	V
Template Known Secondary structure								S	S	S	S						.	.	.	.	.	.	.							T	T	T	T		S													T	T											T	T									T	T							T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
							138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.																					.	.	.	.	.
Query SS confidence		.	.	.	.	.																					.	.	.	.	.
Query Sequence		.	.	.	.	.	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	.	.	.	.	.	G	A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	A	T	V	R	Q	A	F	S	D	A	L	D
Query Conservation		.	.	.	.	.																					.	.	.	.	.
Alig confidence		.	.	.	.	.																					.	.	.	.	.																.	.
Template Conservation																																															.	.
Template Sequence		S	G	H	I	V	E	L	V	A	K	E	Y	L	S	Y	F	H	D	K	N	I	Q	A	L	I	L	G	C	T	H	Y	P	I	I	K	E	S	I	A	K	I	L	D	V	K	.	.	L	I	D	P	S	L	Q	A	S	K	X	L	Y	S	L	L	F
Template Known Secondary structure		S	S												G	G	G	T	T	T			S						S	T	T	G	G	G	G								S		S		.	.
Template Predicted Secondary structure																																															.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions